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3VQ8

HIV-1 IN core domain in complex with (3R)-3,4-dihydro-2H-chromen-3-ylmethanol

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0015074biological_processDNA integration
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD A 1001
ChainResidue
ACYS65
AHIS67
AGLU92
ACD1002
BASP131

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CD A 1002
ChainResidue
ACL1003
AHOH1103
AHOH1108
ACYS65
AGLU92
AASP116
ACD1001

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1003
ChainResidue
ACYS65
AASP116
AASN120
ACD1002

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1004
ChainResidue
ALYS71
AARG166
AHIS171
ALEU172
AHOH1116

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1005
ChainResidue
ATHR66
AHIS67
ALYS159
BARG127

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BCU A 1006
ChainResidue
AALA129
BTHR174

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD B 301
ChainResidue
AASP131
BCYS65
BHIS67
BGLU92
BCD302

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CD B 302
ChainResidue
BCYS65
BGLU92
BASP116
BCD301
BCL303
BHOH405
BHOH407

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 303
ChainResidue
BCYS65
BGLU92
BASP116
BASN120
BCD302

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 304
ChainResidue
BLYS71
BARG166
BGLU170
BHIS171
BLEU172
BHOH434

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 305
ChainResidue
AARG127
AHOH1128
BTHR66
BHIS67
BLYS159

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE BCU B 306
ChainResidue
ATHR174
BALA98
BTHR125
BALA128
BALA129

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PDB entries from 2025-06-18

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