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3VIG

Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin

Functional Information from GO Data
ChainGOidnamespacecontents
A0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
A0005975biological_processcarbohydrate metabolic process
A0008422molecular_functionbeta-glucosidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0102483molecular_functionscopolin beta-glucosidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NOJ A 507
ChainResidue
AGLN45
ATRP452
APHE460
AHOH1223
AHOH1225
AHIS148
AASN192
AGLU193
ATYR337
ATRP374
AGLU402
ATRP444
AGLU451

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE EPE A 508
ChainResidue
AGLU193
ATHR196
AMET207
AASN253
ATYR337
ATRP374
AARG454
AHOH592
AHOH666
AHOH750
AHOH1223
AHOH1224
AHOH1226
AHOH1227
AHOH1228

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 509
ChainResidue
AASN303
AGLU307
AGLU350
AARG355
AHOH866
AHOH891

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A 510
ChainResidue
ALYS179
AASN180
AHOH1007

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 511
ChainResidue
AHOH610
AHOH610
AHOH1183
AHOH1183

Functional Information from PROSITE/UniProt
site_idPS00572
Number of Residues9
DetailsGLYCOSYL_HYDROL_F1_1 Glycosyl hydrolases family 1 active site. VFITENGFS
ChainResidueDetails
AVAL398-SER406

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PDB entries from 2024-07-31

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