Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VER

Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl adenylate intermediate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0005506molecular_functioniron ion binding
A0005524molecular_functionATP binding
A0009058biological_processbiosynthetic process
A0016138biological_processglycoside biosynthetic process
A0016743molecular_functioncarboxyl- or carbamoyltransferase activity
A0016787molecular_functionhydrolase activity
A0016874molecular_functionligase activity
A0017000biological_processantibiotic biosynthetic process
A0046872molecular_functionmetal ion binding
A1901121biological_processtobramycin biosynthetic process
A1901133biological_processkanamycin biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FE2 A 601
ChainResidue
AHIS114
AHIS118
AASP137
AASP338
ACA0604

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 602
ChainResidue
ALEU322
ATHR323
AARG324
AVAL327

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE CA0 A 603
ChainResidue
AARG418
AALA419
AARG445
AARG449
APRO450
APHE451
AMET473
ATHR476
AHIS492
ASER496
ATHR497
AARG498
AASN528
ATHR529
ASER530
AHOH715
AHOH806
AHOH996

site_idAC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CA0 A 604
ChainResidue
AHIS14
ATRP71
AHIS114
AHIS118
AASP137
AGLY138
AGLN139
AGLY168
APHE169
ATYR171
AGLU172
APRO185
AGLY310
AVAL311
AASN314
ASER337
AASP338
AFE2601
AHOH790
AHOH833

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues353
DetailsRegion: {"description":"Kae1-like"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"22383337","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues11
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22383337","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3VET","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22383337","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3VEZ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22383337","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3VEX","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon