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3VEC

Rhodococcus jostii RHA1 DypB D153A variant in complex with heme

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005829cellular_componentcytosol
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004601molecular_functionperoxidase activity
B0005829cellular_componentcytosol
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
C0004601molecular_functionperoxidase activity
C0005829cellular_componentcytosol
C0020037molecular_functionheme binding
C0046872molecular_functionmetal ion binding
C0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues25
DetailsBINDING SITE FOR RESIDUE HEM A 401
ChainResidue
AASP147
AHIS189
AILE206
AARG208
AHIS226
AASN230
AARG244
ATHR259
APHE261
AMET274
AMET278
ALEU149
ASER294
ACL403
AHOH527
AHOH531
AHOH533
AHOH550
APHE151
AVAL152
AGLY154
ATHR155
AGLU156
AGLN185
ATYR187

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 402
ChainResidue
ALYS113
APHE117
AHIS138
AHOH508

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 403
ChainResidue
AARG244
AASN246
AHEM401

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 404
ChainResidue
AALA111
AARG112
ALYS113
AHOH586
AHOH609
BALA111
BARG112
BLYS113
BHOH525

site_idAC5
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEM B 401
ChainResidue
BASP147
BLEU149
BPHE151
BVAL152
BGLY154
BTHR155
BGLU156
BGLN185
BTYR187
BARG208
BHIS226
BVAL227
BASN230
BARG244
BPHE261
BMET274
BMET278
BCL403
BHOH568
BHOH569
BHOH576

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 402
ChainResidue
BLYS113
BHIS138
BHOH537

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 403
ChainResidue
BARG244
BASN246
BHEM401

site_idAC8
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEM C 401
ChainResidue
CASP147
CPHE151
CVAL152
CGLY154
CTHR155
CGLU156
CGLN185
CTYR187
CHIS189
CILE206
CARG208
CHIS226
CASN230
CARG244
CTHR259
CPHE261
CLEU275
CMET278
CSER294
CCL403
CHOH527
CHOH539

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 402
ChainResidue
CLYS113
CPHE117
CHIS138

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 403
ChainResidue
CARG244
CASN246
CHEM401

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PDB entries from 2024-11-06

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