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3VB0

Crystal structure of 2,2',3-trihydroxybiphenyl 1,2-dioxygenase from dibenzofuran-degrading Sphingomonas wittichii strain RW1

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0008198molecular_functionferrous iron binding
B0003824molecular_functioncatalytic activity
B0008198molecular_functionferrous iron binding
C0003824molecular_functioncatalytic activity
C0008198molecular_functionferrous iron binding
D0003824molecular_functioncatalytic activity
D0008198molecular_functionferrous iron binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FE2 A 301
ChainResidue
AHIS147
AHIS209
ATYR250
AGLU260
AHOH501
AHOH502

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE P6G A 302
ChainResidue
AGLY231
ATYR232
AASP233
AMET252
APRO254
AHOH568
CGLU137
AGLN20
AVAL24
AGLU79

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
AGLN5
AARG51
APHE123
AGLY136
AGLU137
AHOH506
DGLN219
DARG222

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FE2 B 301
ChainResidue
BHIS147
BHIS209
BTYR250
BGLU260
BHOH501
BHOH502

site_idAC5
Number of Residues19
DetailsBINDING SITE FOR RESIDUE P6G B 302
ChainResidue
BGLN20
BVAL24
BGLU79
BGLY231
BTYR232
BASP233
BMET251
BMET252
BPRO254
BHOH568
CASN60
CGLY201
CLEU202
CLYS203
CMET206
CVAL207
CHIS208
CALA255
CPHE257

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 B 303
ChainResidue
BGLN5
BARG51
BPHE123
BGLY136
BGLU137
BHOH506
DASP16
DGLN20
DALA78
DGLU82
DVAL88

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FE2 C 300
ChainResidue
CHIS147
CHIS209
CTYR250
CGLU260

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FE2 D 300
ChainResidue
DHIS147
DHIS209
DTYR250
DGLU260

Functional Information from PROSITE/UniProt
site_idPS00082
Number of Residues22
DetailsEXTRADIOL_DIOXYGENAS Extradiol ring-cleavage dioxygenases signature. GqHsndkvysFYmmAPaGfavE
ChainResidueDetails
AGLY239-GLU260

224201

PDB entries from 2024-08-28

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