3USF
Crystal structure of DAVA-4
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006779 | biological_process | porphyrin-containing compound biosynthetic process |
| A | 0006782 | biological_process | protoporphyrinogen IX biosynthetic process |
| A | 0008483 | molecular_function | transaminase activity |
| A | 0015995 | biological_process | chlorophyll biosynthetic process |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0030170 | molecular_function | pyridoxal phosphate binding |
| A | 0033014 | biological_process | tetrapyrrole biosynthetic process |
| A | 0042286 | molecular_function | glutamate-1-semialdehyde 2,1-aminomutase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006779 | biological_process | porphyrin-containing compound biosynthetic process |
| B | 0006782 | biological_process | protoporphyrinogen IX biosynthetic process |
| B | 0008483 | molecular_function | transaminase activity |
| B | 0015995 | biological_process | chlorophyll biosynthetic process |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0030170 | molecular_function | pyridoxal phosphate binding |
| B | 0033014 | biological_process | tetrapyrrole biosynthetic process |
| B | 0042286 | molecular_function | glutamate-1-semialdehyde 2,1-aminomutase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE PLR A 5000 |
| Chain | Residue |
| A | HOZ1 |
| A | ASP1245 |
| A | VAL1247 |
| A | MET1248 |
| A | LYS1273 |
| B | THR2305 |
| A | HOH40 |
| A | HOH78 |
| A | HOH121 |
| A | HOH175 |
| A | GLY1123 |
| A | THR1124 |
| A | TYR1150 |
| A | ASN1217 |
| site_id | AC2 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE HOZ A 1 |
| Chain | Residue |
| A | HOH175 |
| A | HOH210 |
| A | SER1029 |
| A | VAL1031 |
| A | TRP1067 |
| A | SER1163 |
| A | ASN1217 |
| A | MET1248 |
| A | LYS1273 |
| A | GLU1406 |
| A | PLR5000 |
| B | ALA2303 |
| B | GLY2304 |
| B | THR2305 |
| site_id | AC3 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE PLR B 6000 |
| Chain | Residue |
| A | THR1305 |
| B | HOH25 |
| B | HOH52 |
| B | HOH70 |
| B | HOH132 |
| B | SER2122 |
| B | GLY2123 |
| B | THR2124 |
| B | TYR2150 |
| B | ASN2217 |
| B | ASP2245 |
| B | MET2248 |
| B | LYS2273 |
Functional Information from PROSITE/UniProt
| site_id | PS00600 |
| Number of Residues | 37 |
| Details | AA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. LVfDEVmt.GF.RiAyggvqekfgvtp....DLTtlGKiigGG |
| Chain | Residue | Details |
| A | LEU1242-GLY1278 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-(pyridoxal phosphate)lysine","evidences":[{"source":"HAMAP-Rule","id":"MF_00375","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
