3USF

Crystal structure of DAVA-4

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Functional Information from GO Data

ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0042286molecular_functionglutamate-1-semialdehyde 2,1-aminomutase activity
A0030170molecular_functionpyridoxal phosphate binding
A0008483molecular_functiontransaminase activity
A0015995biological_processchlorophyll biosynthetic process
A0006782biological_processprotoporphyrinogen IX biosynthetic process
B0005737cellular_componentcytoplasm
B0042286molecular_functionglutamate-1-semialdehyde 2,1-aminomutase activity
B0030170molecular_functionpyridoxal phosphate binding
B0008483molecular_functiontransaminase activity
B0015995biological_processchlorophyll biosynthetic process
B0006782biological_processprotoporphyrinogen IX biosynthetic process
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Functional Information from PDB Data

site_idNumber of ResiduesDetails
AC114BINDING SITE FOR RESIDUE PLR A 5000
ChainResidue
AHOZ1
AHOH40
AHOH78
AHOH121
AHOH175
AGLY1123
ATHR1124
ATYR1150
AASN1217
AASP1245
AVAL1247
AMET1248
ALYS1273
BTHR2305

AC214BINDING SITE FOR RESIDUE HOZ A 1
ChainResidue
AHOH175
AHOH210
ASER1029
AVAL1031
ATRP1067
ASER1163
AASN1217
AMET1248
ALYS1273
AGLU1406
APLR5000
BALA2303
BGLY2304
BTHR2305

AC313BINDING SITE FOR RESIDUE PLR B 6000
ChainResidue
ATHR1305
BHOH25
BHOH52
BHOH70
BHOH132
BSER2122
BGLY2123
BTHR2124
BTYR2150
BASN2217
BASP2245
BMET2248
BLYS2273

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Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails
HOZ_3usf_A_113(4S)-4,5-DIAMINOPENTANOIC ACID binding site
ChainResidueligand
ASER1029HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
AVAL1031-ARG1032HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
ATRP1067HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
ASER1163-GLY1164HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
AASN1217HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
AMET1248HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
ALYS1273HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
AGLU1406HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID
BALA2303-THR2305HOZ: (4S)-4,5-DIAMINOPENTANOIC ACID

PLR_3usf_A_500017(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE binding site
ChainResidueligand
ASER1122-THR1124PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
ACYS1127PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
ATYR1150-GLY1152PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
AGLU1212PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
AASN1217PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
AASP1245PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
AVAL1247-MET1248PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
ALYS1273PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BGLU2125PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BALA2303-THR2305PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE

PLR_3usf_B_600016(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE binding site
ChainResidueligand
AGLU1125PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
AGLY1304-THR1305PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BSER2122-THR2124PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BCYS2127PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BTYR2150-GLY2152PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BGLU2212PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BASN2217PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BASP2245PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BVAL2247-MET2248PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
BLYS2273PLR: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE

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Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails
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Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails
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Catalytic Information from CSA

site_idNumber of ResiduesDetails