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3U0D

The structure of human Siderocalin bound to the bacterial siderophore 2,3-DHBA

Functional Information from GO Data
ChainGOidnamespacecontents
A0036094molecular_functionsmall molecule binding
B0036094molecular_functionsmall molecule binding
C0036094molecular_functionsmall molecule binding
D0036094molecular_functionsmall molecule binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FE A 179
ChainResidue
ADBH180
ADBH181
ADBH182

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBH A 180
ChainResidue
ADBH181
ADBH182
ASER68
AARG72
ATRP79
AARG81
ALYS134
AFE179

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE DBH A 181
ChainResidue
ATRP79
AARG81
ALEU94
ALEU103
ATYR106
ALYS125
AFE179
ADBH180
ADBH182

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBH A 182
ChainResidue
ATYR106
ALYS125
ALYS134
AFE179
ADBH180
ADBH181
AHOH185
AHOH187

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FE D 179
ChainResidue
DDBH180
DDBH181
DDBH182

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DBH D 180
ChainResidue
DSER68
DTRP79
DLYS134
DFE179
DDBH181
DDBH182

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBH D 181
ChainResidue
DTRP79
DARG81
DTYR100
DTYR106
DLYS125
DFE179
DDBH180
DDBH182

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBH D 182
ChainResidue
DTYR106
DLYS125
DLYS134
DFE179
DDBH180
DDBH181
DHOH185
DHOH197

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FE B 179
ChainResidue
BDBH180
BDBH181
BDBH182

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE DBH B 180
ChainResidue
BTRP79
BARG81
BTYR106
BLYS125
BFE179
BDBH181
BDBH182
BHOH214
BHOH217

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DBH B 181
ChainResidue
BALA40
BTYR106
BLYS134
BFE179
BDBH180
BDBH182
BHOH187

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DBH B 182
ChainResidue
BARG72
BTRP79
BLYS134
BFE179
BDBH180
BDBH181
BHOH214

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FE C 179
ChainResidue
CDBH180
CDBH181
CDBH182

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DBH C 180
ChainResidue
CARG72
CTRP79
CLYS134
CFE179
CDBH181
CDBH182
CHOH202

site_idBC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE DBH C 181
ChainResidue
CTRP79
CARG81
CLEU94
CLEU103
CTYR106
CLYS125
CFE179
CDBH180
CDBH182
CHOH202

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DBH C 182
ChainResidue
CTYR106
CLYS125
CLYS134
CFE179
CDBH180
CDBH181
CHOH183
CHOH197

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 183
ChainResidue
ATHR54
ATYR138

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 183
ChainResidue
BTHR54
BTYR138

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL D 183
ChainResidue
DTHR54
DTYR138

Functional Information from PROSITE/UniProt
site_idPS00213
Number of Residues14
DetailsLIPOCALIN Lipocalin signature. NFQdnQFQGKWYVV
ChainResidueDetails
AASN21-VAL34

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PDB","id":"1X89","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1X8U","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PDB","id":"3CMP","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15642259","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1X89","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1X8U","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"10684642","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15084671","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16335952","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16740002","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"7683678","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DFV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QQS","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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