3TR5
Structure of a peptide chain release factor 3 (prfC) from Coxiella burnetii
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003924 | molecular_function | GTPase activity |
| A | 0005525 | molecular_function | GTP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006412 | biological_process | translation |
| A | 0006415 | biological_process | translational termination |
| A | 0006449 | biological_process | regulation of translational termination |
| A | 0016149 | molecular_function | translation release factor activity, codon specific |
| A | 0016150 | molecular_function | translation release factor activity, codon nonspecific |
| A | 0097216 | molecular_function | guanosine tetraphosphate binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003924 | molecular_function | GTPase activity |
| B | 0005525 | molecular_function | GTP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006412 | biological_process | translation |
| B | 0006415 | biological_process | translational termination |
| B | 0006449 | biological_process | regulation of translational termination |
| B | 0016149 | molecular_function | translation release factor activity, codon specific |
| B | 0016150 | molecular_function | translation release factor activity, codon nonspecific |
| B | 0097216 | molecular_function | guanosine tetraphosphate binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0003924 | molecular_function | GTPase activity |
| C | 0005525 | molecular_function | GTP binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0006412 | biological_process | translation |
| C | 0006415 | biological_process | translational termination |
| C | 0006449 | biological_process | regulation of translational termination |
| C | 0016149 | molecular_function | translation release factor activity, codon specific |
| C | 0016150 | molecular_function | translation release factor activity, codon nonspecific |
| C | 0097216 | molecular_function | guanosine tetraphosphate binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0003924 | molecular_function | GTPase activity |
| D | 0005525 | molecular_function | GTP binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005829 | cellular_component | cytosol |
| D | 0006412 | biological_process | translation |
| D | 0006415 | biological_process | translational termination |
| D | 0006449 | biological_process | regulation of translational termination |
| D | 0016149 | molecular_function | translation release factor activity, codon specific |
| D | 0016150 | molecular_function | translation release factor activity, codon nonspecific |
| D | 0097216 | molecular_function | guanosine tetraphosphate binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA A 526 |
| Chain | Residue |
| A | GLN370 |
| A | GLN414 |
| A | GLU417 |
| A | HOH730 |
| site_id | AC2 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE GDP A 527 |
| Chain | Residue |
| A | THR25 |
| A | HIS89 |
| A | ASN139 |
| A | LYS140 |
| A | ASP142 |
| A | ARG143 |
| A | SER254 |
| A | ALA255 |
| A | ILE256 |
| A | HOH533 |
| A | HOH558 |
| A | HOH629 |
| A | HOH650 |
| A | HOH778 |
| A | ASP20 |
| A | ALA21 |
| A | GLY22 |
| A | LYS23 |
| A | THR24 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CA B 526 |
| Chain | Residue |
| B | GLN370 |
| B | GLN414 |
| B | GLU417 |
| B | HOH645 |
| B | HOH1130 |
| B | HOH1158 |
| B | HOH1217 |
| site_id | AC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE GDP B 527 |
| Chain | Residue |
| B | ASP20 |
| B | ALA21 |
| B | GLY22 |
| B | LYS23 |
| B | THR24 |
| B | THR25 |
| B | HIS89 |
| B | ASN139 |
| B | LYS140 |
| B | ASP142 |
| B | ARG143 |
| B | SER254 |
| B | ALA255 |
| B | ILE256 |
| B | HOH610 |
| B | HOH620 |
| B | HOH1129 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA C 526 |
| Chain | Residue |
| C | GLN370 |
| C | GLN414 |
| C | GLU417 |
| C | HOH613 |
| C | HOH865 |
| C | HOH1032 |
| site_id | AC6 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE GDP C 527 |
| Chain | Residue |
| C | ASP20 |
| C | ALA21 |
| C | GLY22 |
| C | LYS23 |
| C | THR24 |
| C | THR25 |
| C | HIS89 |
| C | ASN139 |
| C | LYS140 |
| C | ASP142 |
| C | ARG143 |
| C | SER254 |
| C | ALA255 |
| C | ILE256 |
| C | HOH545 |
| C | HOH757 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA D 526 |
| Chain | Residue |
| D | GLN370 |
| D | GLN414 |
| D | GLU417 |
| D | HOH707 |
| site_id | AC8 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE GDP D 527 |
| Chain | Residue |
| D | ASP20 |
| D | ALA21 |
| D | GLY22 |
| D | LYS23 |
| D | THR24 |
| D | THR25 |
| D | HIS89 |
| D | ASN139 |
| D | LYS140 |
| D | ASP142 |
| D | SER254 |
| D | ALA255 |
| D | ILE256 |
| D | HOH584 |
| D | HOH640 |
| D | HOH696 |
| D | HOH723 |
| D | HOH1051 |
Functional Information from PROSITE/UniProt
| site_id | PS00301 |
| Number of Residues | 16 |
| Details | G_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DWmelEKqRGISVttS |
| Chain | Residue | Details |
| A | ASP55-SER70 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 44 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00072","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
