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3TAK

Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
A0009085biological_processlysine biosynthetic process
A0009089biological_processlysine biosynthetic process via diaminopimelate
A0016829molecular_functionlyase activity
A0019877biological_processdiaminopimelate biosynthetic process
A0044281biological_processsmall molecule metabolic process
A0046872molecular_functionmetal ion binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
B0009085biological_processlysine biosynthetic process
B0009089biological_processlysine biosynthetic process via diaminopimelate
B0016829molecular_functionlyase activity
B0019877biological_processdiaminopimelate biosynthetic process
B0044281biological_processsmall molecule metabolic process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 292
ChainResidue
ATYR133
AARG138
AGLY186
APHE244
AASN248
APYR294
AHOH408

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 293
ChainResidue
ATRP21
ALYS22
AHOH350
AHOH473
AHOH511
ALEU14
AASP20

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PYR A 294
ChainResidue
AALA8
ATHR44
ATHR45
ALEU101
ATYR133
ALYS161
AILE203
AGOL292
AHOH517

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 292
ChainResidue
BGLY179
BALA182
BASP200
BGOL293
BHOH299
BHOH594

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 293
ChainResidue
BMET195
BGLY198
BALA199
BILE222
BLYS224
BGOL292
BHOH632

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 294
ChainResidue
BTYR133
BARG138
BLYS161
BALA163
BGLY186
BPHE244
BASN248
BPYR295

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PYR B 295
ChainResidue
BALA8
BTHR44
BTHR45
BLEU101
BTYR133
BLYS161
BILE203
BGOL294
BHOH491
BHOH553

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PEG B 296
ChainResidue
BLYS69
BARG70
BILE71
BPRO72
BASP98
BHOH533
BHOH611

Functional Information from PROSITE/UniProt
site_idPS00665
Number of Residues18
DetailsDHDPS_1 Dihydrodipicolinate synthase signature 1. SIVavGTTGEAstlsmeE
ChainResidueDetails
ASER38-GLU55

site_idPS00666
Number of Residues31
DetailsDHDPS_2 Dihydrodipicolinate synthase signature 2. YNVPgrTgvdLsndtavrlaeipn.IvGIKDA
ChainResidueDetails
ATYR133-ALA163

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PDB entries from 2024-07-24

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