3T54
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ATP and Cadmium
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000829 | molecular_function | inositol heptakisphosphate kinase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE ATP A 401 |
Chain | Residue |
A | ARG134 |
A | MET240 |
A | ASP246 |
A | LYS248 |
A | SER264 |
A | ASP309 |
A | LEU311 |
A | ASP321 |
A | ASN323 |
A | HOH369 |
A | HOH415 |
A | PRO149 |
A | HOH424 |
A | HOH425 |
A | HOH497 |
A | HOH550 |
A | CD601 |
A | CD602 |
A | CD606 |
A | LYS187 |
A | HIS194 |
A | LEU211 |
A | ARG213 |
A | GLU237 |
A | GLU238 |
A | PHE239 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CD A 601 |
Chain | Residue |
A | ASP321 |
A | ASN323 |
A | ATP401 |
A | HOH425 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CD A 602 |
Chain | Residue |
A | ASP309 |
A | ASP321 |
A | ATP401 |
A | HOH424 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CD A 603 |
Chain | Residue |
A | THR251 |
A | CYS298 |
A | GLN303 |
A | THR304 |
A | CYS306 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CD A 604 |
Chain | Residue |
A | GLU62 |
A | CYS164 |
A | HOH423 |
A | HOH426 |
A | HOH619 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CD A 605 |
Chain | Residue |
A | CYS164 |
A | HOH422 |
A | HOH618 |
A | HOH623 |
A | HOH629 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CD A 606 |
Chain | Residue |
A | LYS187 |
A | GLU237 |
A | CYS320 |
A | ATP401 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | LYS53 | |
A | LYS248 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T7A, ECO:0007744|PDB:3T99, ECO:0007744|PDB:3T9A, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | ARG134 | |
A | LYS187 | |
A | HIS194 | |
A | GLU237 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9A, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D |
Chain | Residue | Details |
A | ARG213 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T9A, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D |
Chain | Residue | Details |
A | ASP246 |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | ARG262 |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T7A |
Chain | Residue | Details |
A | SER264 |
site_id | SWS_FT_FI7 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T7A, ECO:0007744|PDB:3T99, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | ASP309 |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54 |
Chain | Residue | Details |
A | ASP321 |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E |
Chain | Residue | Details |
A | SER326 |
site_id | SWS_FT_FI10 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569 |
Chain | Residue | Details |
A | SER38 |
site_id | SWS_FT_FI11 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER223 |