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3SSJ

Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016829molecular_functionlyase activity
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE FNU A 248
ChainResidue
AASP20
ASER127
APRO180
AGLN185
AGLY202
AARG203
AHOH252
AHOH253
AHOH257
AHOH259
AHOH263
ALYS42
AHOH273
AASP70
ALYS72
AASP75
AILE76
ATHR79
ALEU123
AMET126

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL A 1614
ChainResidue
AGLU33
ATHR159
APRO161
AGLY186
AASN210
AHOH270
AHOH281
AHOH331
AHOH342
AHOH399
AHOH416

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IIaDfKvaDIPeTN
ChainResidueDetails
AILE67-ASN80

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton donor"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues24
DetailsBinding site: {}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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