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3S2M

Crystal structure of dipeptidase from Streptomyces coelicolor complexed with phosphinate pseudodipeptide L-Phe-D-Asp

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0016805molecular_functiondipeptidase activity
A0046872molecular_functionmetal ion binding
A0070573molecular_functionmetallodipeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE P5D A 401
ChainResidue
AHIS20
APHE248
AASP320
AGLY323
ATHR324
AZN402
AZN403
AHOH696
AHOH750
AHOH816
AHOH826
AASP22
AHOH841
ATRP25
ATYR68
AGLU123
AHIS150
AHIS191
AHIS212
AARG223

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 402
ChainResidue
AHIS20
AASP22
AGLU123
AP5D401

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 403
ChainResidue
AGLU123
AHIS191
AHIS212
AP5D401

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 404
ChainResidue
APHE14
ASER352
AALA355
ALYS360
AASP367
AARG374
AHOH630
AHOH657

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 405
ChainResidue
AHIS126
AASN130
AASN154
AALA155
AHOH548
AHOH741

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 406
ChainResidue
AVAL218
ACYS219
AVAL249
ALEU250
AGLN251
AASP301
AHOH497

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 407
ChainResidue
AHIS49
AHOH665

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 408
ChainResidue
AARG182
AGLU183
AARG377
AHOH770
AHOH873

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 409
ChainResidue
AASP85
AALA137
AHOH441
AHOH866

237992

PDB entries from 2025-06-25

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