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3RYE

Human FDPS Synthase in Complex with a N-Methyl Pyridinum Bisphosphonate

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE UNR A 901
ChainResidue
AHOH3
AHOH373
AHOH416
AHOH417
AHOH476
AHOH496
AHOH497
AHOH499
AHOH500
AHOH501
AMG907
AASP103
AMG908
AMG909
AASP107
AARG112
AGLN171
ALYS200
ATHR201
AASP243
ALYS257

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 907
ChainResidue
AASP103
AASP107
AHOH497
AHOH500
AUNR901
AMG909

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 908
ChainResidue
AASP243
AHOH476
AHOH496
AHOH499
AUNR901

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 909
ChainResidue
AHOH3
AASP103
AASP107
AHOH433
AHOH501
AUNR901
AMG907

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 1001
ChainResidue
AHOH4
AGLY56
ALYS57
AGLN96
AARG113
AHOH354
AHOH370

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
AMET235-ASP247

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
ALEU100-GLY114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"16684881","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1ZW5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsSite: {"description":"Important for determining product chain length","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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