3RUF
Alternative analogs as viable substrates of UDP-hexose 4-epimerases
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003974 | molecular_function | UDP-N-acetylglucosamine 4-epimerase activity |
| A | 0009243 | biological_process | O antigen biosynthetic process |
| A | 0016853 | molecular_function | isomerase activity |
| b | 0000166 | molecular_function | nucleotide binding |
| b | 0003974 | molecular_function | UDP-N-acetylglucosamine 4-epimerase activity |
| b | 0009243 | biological_process | O antigen biosynthetic process |
| b | 0016853 | molecular_function | isomerase activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003974 | molecular_function | UDP-N-acetylglucosamine 4-epimerase activity |
| B | 0009243 | biological_process | O antigen biosynthetic process |
| B | 0016853 | molecular_function | isomerase activity |
| S | 0000166 | molecular_function | nucleotide binding |
| S | 0003974 | molecular_function | UDP-N-acetylglucosamine 4-epimerase activity |
| S | 0009243 | biological_process | O antigen biosynthetic process |
| S | 0016853 | molecular_function | isomerase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 31 |
| Details | BINDING SITE FOR RESIDUE NAD A 343 |
| Chain | Residue |
| A | GLY23 |
| A | THR51 |
| A | GLY52 |
| A | GLY77 |
| A | ASP78 |
| A | ILE79 |
| A | GLN98 |
| A | ALA99 |
| A | ALA100 |
| A | THR117 |
| A | ALA140 |
| A | ALA25 |
| A | ALA141 |
| A | TYR166 |
| A | LYS170 |
| A | TYR193 |
| A | VAL196 |
| A | HOH346 |
| A | HOH348 |
| A | HOH380 |
| A | HOH386 |
| A | HOH421 |
| A | GLY26 |
| A | HOH462 |
| A | HOH606 |
| A | PHE27 |
| A | ILE28 |
| A | ASP47 |
| A | ASN48 |
| A | PHE49 |
| A | SER50 |
| site_id | AC2 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE UDP A 344 |
| Chain | Residue |
| A | ASN195 |
| A | ALA209 |
| A | VAL210 |
| A | LYS213 |
| A | TRP214 |
| A | TYR225 |
| A | ILE226 |
| A | ASN227 |
| A | THR232 |
| A | ARG234 |
| A | LEU271 |
| A | ARG299 |
| A | ASP302 |
| A | HOH359 |
| A | HOH425 |
| A | HOH1023 |
| site_id | AC3 |
| Number of Residues | 34 |
| Details | BINDING SITE FOR RESIDUE NAD B 343 |
| Chain | Residue |
| B | GLY23 |
| B | ALA25 |
| B | GLY26 |
| B | PHE27 |
| B | ILE28 |
| B | ASP47 |
| B | ASN48 |
| B | PHE49 |
| B | SER50 |
| B | THR51 |
| B | GLY52 |
| B | GLY77 |
| B | ASP78 |
| B | ILE79 |
| B | GLN98 |
| B | ALA99 |
| B | ALA100 |
| B | THR117 |
| B | ALA140 |
| B | ALA141 |
| B | TYR166 |
| B | LYS170 |
| B | TYR193 |
| B | ASN195 |
| B | VAL196 |
| B | HOH346 |
| B | HOH348 |
| B | HOH368 |
| B | HOH377 |
| B | HOH390 |
| B | HOH392 |
| B | HOH404 |
| B | HOH407 |
| B | HOH578 |
| site_id | AC4 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE UDP B 344 |
| Chain | Residue |
| B | ASN195 |
| B | ALA209 |
| B | VAL210 |
| B | LYS213 |
| B | TYR225 |
| B | ILE226 |
| B | ASN227 |
| B | THR232 |
| B | ARG234 |
| B | LEU271 |
| B | ARG299 |
| B | ASP302 |
| B | HOH372 |
| B | HOH388 |
| B | HOH412 |
| B | HOH746 |
| site_id | AC5 |
| Number of Residues | 32 |
| Details | BINDING SITE FOR RESIDUE NAD S 343 |
| Chain | Residue |
| S | GLY26 |
| S | PHE27 |
| S | ILE28 |
| S | LEU46 |
| S | ASP47 |
| S | ASN48 |
| S | PHE49 |
| S | SER50 |
| S | THR51 |
| S | GLY52 |
| S | GLY77 |
| S | ASP78 |
| S | ILE79 |
| S | GLN98 |
| S | ALA99 |
| S | ALA100 |
| S | THR117 |
| S | ALA140 |
| S | ALA141 |
| S | TYR166 |
| S | LYS170 |
| S | TYR193 |
| S | ASN195 |
| S | VAL196 |
| S | HOH367 |
| S | HOH372 |
| S | HOH388 |
| S | HOH393 |
| S | HOH491 |
| S | HOH500 |
| S | GLY23 |
| S | ALA25 |
| site_id | AC6 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE UDP S 344 |
| Chain | Residue |
| S | ASN195 |
| S | VAL210 |
| S | LYS213 |
| S | TRP214 |
| S | TYR225 |
| S | ILE226 |
| S | ASN227 |
| S | THR232 |
| S | ARG234 |
| S | LEU271 |
| S | ARG299 |
| S | ASP302 |
| S | HOH380 |
| S | HOH381 |
| S | HOH463 |
| site_id | AC7 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD b 344 |
| Chain | Residue |
| b | GLY23 |
| b | ALA25 |
| b | GLY26 |
| b | PHE27 |
| b | ILE28 |
| b | ASP47 |
| b | ASN48 |
| b | PHE49 |
| b | SER50 |
| b | THR51 |
| b | GLY52 |
| b | GLY77 |
| b | ASP78 |
| b | ILE79 |
| b | GLN98 |
| b | ALA99 |
| b | ALA100 |
| b | THR117 |
| b | ALA140 |
| b | ALA141 |
| b | TYR166 |
| b | LYS170 |
| b | TYR193 |
| b | ASN195 |
| b | VAL196 |
| b | HOH356 |
| b | HOH363 |
| b | HOH381 |
| b | HOH393 |
| b | HOH401 |
| b | HOH408 |
| b | HOH412 |
| b | HOH415 |
| site_id | AC8 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE UDP b 343 |
| Chain | Residue |
| b | ASN195 |
| b | ALA209 |
| b | VAL210 |
| b | LYS213 |
| b | TRP214 |
| b | TYR225 |
| b | ASN227 |
| b | THR232 |
| b | ARG234 |
| b | LEU271 |
| b | ARG299 |
| b | ASP302 |
| b | HOH391 |
| b | HOH394 |
| b | HOH476 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 A 345 |
| Chain | Residue |
| A | ARG4 |
| A | LYS253 |
| A | LYS318 |
| B | HIS53 |
| B | GLN54 |
| B | TYR55 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 28 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:21384454, ECO:0000269|PubMed:21810411, ECO:0000312|PDB:3LU1, ECO:0000312|PDB:3RU7, ECO:0000312|PDB:3RU9, ECO:0000312|PDB:3RUA, ECO:0000312|PDB:3RUC, ECO:0000312|PDB:3RUD, ECO:0000312|PDB:3RUE, ECO:0000312|PDB:3RUF, ECO:0000312|PDB:3RUH |
| Chain | Residue | Details |
| A | GLY23 | |
| B | ASP78 | |
| B | GLN98 | |
| B | TYR166 | |
| B | LYS170 | |
| B | VAL196 | |
| S | GLY23 | |
| S | ASP47 | |
| S | ASP78 | |
| S | GLN98 | |
| S | TYR166 | |
| A | ASP47 | |
| S | LYS170 | |
| S | VAL196 | |
| b | GLY23 | |
| b | ASP47 | |
| b | ASP78 | |
| b | GLN98 | |
| b | TYR166 | |
| b | LYS170 | |
| b | VAL196 | |
| A | ASP78 | |
| A | GLN98 | |
| A | TYR166 | |
| A | LYS170 | |
| A | VAL196 | |
| B | GLY23 | |
| B | ASP47 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:21384454, ECO:0000269|PubMed:21810411, ECO:0000312|PDB:3RUA, ECO:0000312|PDB:3RUC |
| Chain | Residue | Details |
| A | THR117 | |
| B | THR117 | |
| S | THR117 | |
| b | THR117 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 24 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:21384454, ECO:0000269|PubMed:21810411 |
| Chain | Residue | Details |
| A | SER142 | |
| B | TYR225 | |
| B | ARG234 | |
| B | ARG299 | |
| S | SER142 | |
| S | TYR193 | |
| S | VAL210 | |
| S | TYR225 | |
| S | ARG234 | |
| S | ARG299 | |
| b | SER142 | |
| A | TYR193 | |
| b | TYR193 | |
| b | VAL210 | |
| b | TYR225 | |
| b | ARG234 | |
| b | ARG299 | |
| A | VAL210 | |
| A | TYR225 | |
| A | ARG234 | |
| A | ARG299 | |
| B | SER142 | |
| B | TYR193 | |
| B | VAL210 |
