English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3RUC

Specific recognition of N-acetylated substrates and domain flexibility in WbgU: a UDP-GalNAc 4-epimerase

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0003974	molecular_function	UDP-N-acetylglucosamine 4-epimerase activity
A	0009243	biological_process	O antigen biosynthetic process
A	0016853	molecular_function	isomerase activity
B	0000166	molecular_function	nucleotide binding
B	0003974	molecular_function	UDP-N-acetylglucosamine 4-epimerase activity
B	0009243	biological_process	O antigen biosynthetic process
B	0016853	molecular_function	isomerase activity
C	0000166	molecular_function	nucleotide binding
C	0003974	molecular_function	UDP-N-acetylglucosamine 4-epimerase activity
C	0009243	biological_process	O antigen biosynthetic process
C	0016853	molecular_function	isomerase activity
D	0000166	molecular_function	nucleotide binding
D	0003974	molecular_function	UDP-N-acetylglucosamine 4-epimerase activity
D	0009243	biological_process	O antigen biosynthetic process
D	0016853	molecular_function	isomerase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	31
Details	BINDING SITE FOR RESIDUE NAD A 343

Chain	Residue
A	GLY23
A	GLY52
A	GLY77
A	ASP78
A	ILE79
A	GLN98
A	ALA99
A	ALA100
A	THR117
A	ALA140
A	ALA141
A	ALA25
A	SER142
A	TYR166
A	LYS170
A	TYR193
A	ASN195
A	VAL196
A	UD2344
A	HOH346
A	HOH355
A	HOH359
A	GLY26
A	HOH372
A	HOH402
A	PHE27
A	ILE28
A	ASP47
A	ASN48
A	SER50
A	THR51

site_id	AC2
Number of Residues	23
Details	BINDING SITE FOR RESIDUE UD2 A 344

Chain	Residue
A	SER103
A	SER142
A	SER143
A	SER144
A	TYR166
A	TYR193
A	ASN195
A	ALA209
A	VAL210
A	LYS213
A	TYR225
A	ILE226
A	ASN227
A	THR232
A	ARG234
A	LEU271
A	ARG299
A	ASP302
A	NAD343
A	HOH360
A	HOH413
A	HOH426
A	HOH433

site_id	AC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 A 345

Chain	Residue
A	ARG4
A	LYS253
A	LYS318
B	HIS53
B	GLN54
B	TYR55

site_id	AC4
Number of Residues	29
Details	BINDING SITE FOR RESIDUE NAD B 343

Chain	Residue
B	GLY23
B	ALA25
B	GLY26
B	PHE27
B	ILE28
B	ASP47
B	ASN48
B	SER50
B	THR51
B	GLY52
B	GLY77
B	ASP78
B	ILE79
B	GLN98
B	ALA99
B	ALA100
B	THR117
B	ALA140
B	ALA141
B	TYR166
B	LYS170
B	TYR193
B	ASN195
B	VAL196
B	UD2344
B	HOH356
B	HOH359
B	HOH368
B	HOH373

site_id	AC5
Number of Residues	24
Details	BINDING SITE FOR RESIDUE UD2 B 344

Chain	Residue
B	TRP214
B	TYR225
B	ILE226
B	ASN227
B	THR232
B	ARG234
B	LEU271
B	ARG299
B	ASP302
B	VAL303
B	SER306
B	NAD343
B	HOH352
B	HOH404
B	SER103
B	SER142
B	SER143
B	SER144
B	TYR166
B	TYR193
B	ASN195
B	ALA209
B	VAL210
B	LYS213

site_id	AC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 B 345

Chain	Residue
A	HIS53
A	GLN54
A	TYR55
B	ARG4
B	LYS253
B	LYS318

site_id	AC7
Number of Residues	33
Details	BINDING SITE FOR RESIDUE NAD C 343

Chain	Residue
C	GLY23
C	ALA25
C	GLY26
C	PHE27
C	ILE28
C	ASP47
C	ASN48
C	SER50
C	THR51
C	GLY52
C	GLY77
C	ASP78
C	ILE79
C	ARG80
C	GLN98
C	ALA99
C	ALA100
C	THR117
C	ALA140
C	ALA141
C	TYR166
C	LYS170
C	TYR193
C	ASN195
C	VAL196
C	GLN201
C	UD2344
C	HOH370
C	HOH372
C	HOH376
C	HOH385
C	HOH403
C	HOH406

site_id	AC8
Number of Residues	24
Details	BINDING SITE FOR RESIDUE UD2 C 344

Chain	Residue
C	GLY102
C	SER103
C	SER142
C	SER143
C	SER144
C	TYR166
C	TYR193
C	ASN195
C	ALA209
C	VAL210
C	LYS213
C	TRP214
C	TYR225
C	ILE226
C	ASN227
C	THR232
C	ARG234
C	LEU271
C	ARG299
C	ASP302
C	VAL303
C	NAD343
C	HOH377
C	HOH432

site_id	AC9
Number of Residues	31
Details	BINDING SITE FOR RESIDUE NAD D 343

Chain	Residue
D	GLY23
D	ALA25
D	GLY26
D	PHE27
D	ILE28
D	ASP47
D	ASN48
D	SER50
D	THR51
D	GLY52
D	GLY77
D	ASP78
D	ILE79
D	GLN98
D	ALA99
D	ALA100
D	THR117
D	ALA140
D	ALA141
D	TYR166
D	LYS170
D	TYR193
D	ASN195
D	VAL196
D	GLN201
D	UD2344
D	HOH355
D	HOH360
D	HOH371
D	HOH374
D	HOH379

site_id	BC1
Number of Residues	25
Details	BINDING SITE FOR RESIDUE UD2 D 344

Chain	Residue
D	SER103
D	SER142
D	SER143
D	SER144
D	TYR166
D	TYR193
D	ASN195
D	ALA209
D	VAL210
D	LYS213
D	TRP214
D	TYR225
D	ILE226
D	ASN227
D	THR232
D	ARG234
D	LEU271
D	ARG299
D	ASP302
D	VAL303
D	SER306
D	NAD343
D	HOH390
D	HOH397
D	HOH409

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	64
Details	Binding site: {"evidences":[{"source":"PubMed","id":"21384454","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21810411","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3LU1","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RU7","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RU9","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUA","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUC","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUD","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUE","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUF","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUH","evidenceCode":"ECO:0000312"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"21384454","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21810411","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3RUA","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3RUC","evidenceCode":"ECO:0000312"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	48
Details	Binding site: {"evidences":[{"source":"PubMed","id":"21384454","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21810411","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

243531

PDB entries from 2025-10-22

PDB statistics

PDBj update info

Contact PDBj

numon