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3RIS

Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme

Functional Information from GO Data
ChainGOidnamespacecontents
A0004843molecular_functioncysteine-type deubiquitinase activity
A0006511biological_processubiquitin-dependent protein catabolic process
A0016579biological_processprotein deubiquitination
A0031011cellular_componentIno80 complex
A0070628molecular_functionproteasome binding
B0004843molecular_functioncysteine-type deubiquitinase activity
B0006511biological_processubiquitin-dependent protein catabolic process
B0016579biological_processprotein deubiquitination
B0031011cellular_componentIno80 complex
B0070628molecular_functionproteasome binding
C0004843molecular_functioncysteine-type deubiquitinase activity
C0006511biological_processubiquitin-dependent protein catabolic process
C0016579biological_processprotein deubiquitination
C0031011cellular_componentIno80 complex
C0070628molecular_functionproteasome binding
D0004843molecular_functioncysteine-type deubiquitinase activity
D0006511biological_processubiquitin-dependent protein catabolic process
D0016579biological_processprotein deubiquitination
D0031011cellular_componentIno80 complex
D0070628molecular_functionproteasome binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 241
ChainResidue
AARG137
AGLN138
AHOH252
AHOH291
CGLN146

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 241
ChainResidue
DGLN146
BARG137
BGLN138
BHOH248
BHOH269

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 242
ChainResidue
BARG174
BGLY189
BALA190

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 241
ChainResidue
BGLN146
DARG137
DGLN138

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsSite: {"description":"Transition state stabilizer","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsSite: {"description":"Important for enzyme activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9WUP7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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