Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RG6

Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004497molecular_functionmonooxygenase activity
A0005515molecular_functionprotein binding
A0009853biological_processphotorespiration
A0015977biological_processcarbon fixation
A0015979biological_processphotosynthesis
A0016491molecular_functionoxidoreductase activity
A0016829molecular_functionlyase activity
A0016984molecular_functionribulose-bisphosphate carboxylase activity
A0019253biological_processreductive pentose-phosphate cycle
A0031470cellular_componentcarboxysome
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0004497molecular_functionmonooxygenase activity
B0005515molecular_functionprotein binding
B0009853biological_processphotorespiration
B0015977biological_processcarbon fixation
B0015979biological_processphotosynthesis
B0016491molecular_functionoxidoreductase activity
B0016829molecular_functionlyase activity
B0016984molecular_functionribulose-bisphosphate carboxylase activity
B0019253biological_processreductive pentose-phosphate cycle
B0031470cellular_componentcarboxysome
B0046872molecular_functionmetal ion binding
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0006457biological_processprotein folding
C0015977biological_processcarbon fixation
C0015979biological_processphotosynthesis
C0031470cellular_componentcarboxysome
C0042803molecular_functionprotein homodimerization activity
C0044183molecular_functionprotein folding chaperone
C0110102biological_processribulose bisphosphate carboxylase complex assembly
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0006457biological_processprotein folding
D0015977biological_processcarbon fixation
D0015979biological_processphotosynthesis
D0031470cellular_componentcarboxysome
D0042803molecular_functionprotein homodimerization activity
D0044183molecular_functionprotein folding chaperone
D0110102biological_processribulose bisphosphate carboxylase complex assembly
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0006457biological_processprotein folding
E0015977biological_processcarbon fixation
E0015979biological_processphotosynthesis
E0031470cellular_componentcarboxysome
E0042803molecular_functionprotein homodimerization activity
E0044183molecular_functionprotein folding chaperone
E0110102biological_processribulose bisphosphate carboxylase complex assembly
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0006457biological_processprotein folding
F0015977biological_processcarbon fixation
F0015979biological_processphotosynthesis
F0031470cellular_componentcarboxysome
F0042803molecular_functionprotein homodimerization activity
F0044183molecular_functionprotein folding chaperone
F0110102biological_processribulose bisphosphate carboxylase complex assembly
Functional Information from PROSITE/UniProt
site_idPS00157
Number of Residues9
DetailsRUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GlDFtKdDE
ChainResidueDetails
AGLY193-GLU201

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsMotif: {"description":"Interacts with RbcX2","evidences":[{"source":"PubMed","id":"17574029","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Proton acceptor"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"description":"in homodimeric partner"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues10
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsBinding site: {"description":"via carbamate group","evidences":[{"source":"PubMed","id":"8245022","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"8245022","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsSite: {"description":"Transition state stabilizer"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PubMed","id":"16593333","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 907
ChainResidueDetails
ALYS172electrostatic stabiliser, metal ligand, proton donor
ALYS198metal ligand, nucleophile, proton donor
AASP200metal ligand
AGLU201metal ligand
AHIS291proton acceptor
ALYS331electrostatic stabiliser

site_idMCSA2
Number of Residues6
DetailsM-CSA 907
ChainResidueDetails

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon