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3RFC

Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0008716molecular_functionD-alanine-D-alanine ligase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ADP A 368
ChainResidue
APHE183
AASN314
AGLU315
AMG369
AHOH486
AHOH489
AHOH507
ALYS185
ASER192
AGLU221
AALA222
AALA223
AVAL224
AGLU228
APHE304

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 369
ChainResidue
AASP302
AASN314
AGLU315
AADP368
AHOH447

Functional Information from PROSITE/UniProt
site_idPS00843
Number of Residues12
DetailsDALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGtlGEDGsLQG
ChainResidueDetails
AHIS107-GLY118

site_idPS00844
Number of Residues29
DetailsDALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LgcaGmARVDVFlcadgriv....InEVNTlPG
ChainResidueDetails
ALEU293-GLY321

244693

PDB entries from 2025-11-12

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