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3RC7

Crystal Structure of the Y186F mutant of KijD10, a 3-ketoreductase from Actinomadura kijaniata in complex with TDP-benzene and NADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016491molecular_functionoxidoreductase activity
A0017000biological_processantibiotic biosynthetic process
A0042843biological_processD-xylose catabolic process
A0047837molecular_functionD-xylose 1-dehydrogenase (NADP+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues27
DetailsBINDING SITE FOR RESIDUE NAP A 333
ChainResidue
AGLY16
ATYR63
APRO78
ALEU79
APRO80
ALEU83
AHIS84
AGLU101
ALYS102
AILE169
AARG170
ACYS17
AVAL175
AASP182
ATLO337
AHOH415
AHOH416
AHOH436
AHOH530
AHOH531
AALA18
AASP19
AILE20
AARG23
ASER42
AARG43
AARG47

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 334
ChainResidue
AASN256
AHIS270

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 335
ChainResidue
AARG323
ATHR324
AALA326
AASP328

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 336
ChainResidue
AHIS285
ALYS290
AHOH470

site_idAC5
Number of Residues15
DetailsBINDING SITE FOR RESIDUE TLO A 337
ChainResidue
AARG23
AARG24
APHE159
AILE161
APRO162
ATYR240
AARG257
ATHR260
AGLN274
ANAP333
AHOH457
AHOH477
AHOH478
AHOH505
AHOH561

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 338
ChainResidue
ALYS102
AMET130
APHE131
APHE186

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000269|PubMed:21598943, ECO:0007744|PDB:3RBV, ECO:0007744|PDB:3RC1, ECO:0007744|PDB:3RC2, ECO:0007744|PDB:3RC7, ECO:0007744|PDB:3RC9, ECO:0007744|PDB:3RCB
ChainResidueDetails
ALYS102

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:21598943, ECO:0007744|PDB:3RBV, ECO:0007744|PDB:3RC1, ECO:0007744|PDB:3RC2, ECO:0007744|PDB:3RC7, ECO:0007744|PDB:3RC9, ECO:0007744|PDB:3RCB
ChainResidueDetails
ASER42
ATYR63
AASP182
ACYS17

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:21598943, ECO:0007744|PDB:3RC1, ECO:0007744|PDB:3RC2, ECO:0007744|PDB:3RC7, ECO:0007744|PDB:3RC9, ECO:0007744|PDB:3RCB
ChainResidueDetails
AARG24
ATYR240
ATHR260

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:21598943, ECO:0007744|PDB:3RBV, ECO:0007744|PDB:3RC1, ECO:0007744|PDB:3RC2, ECO:0007744|PDB:3RC7, ECO:0007744|PDB:3RCB
ChainResidueDetails
ALEU79
AHIS84

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:21598943, ECO:0007744|PDB:3RC1, ECO:0007744|PDB:3RC7
ChainResidueDetails
AARG170

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PDB entries from 2024-06-12

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