Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016874 | molecular_function | ligase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0071555 | biological_process | cell wall organization |
B | 0003824 | molecular_function | catalytic activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016874 | molecular_function | ligase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0071555 | biological_process | cell wall organization |
C | 0003824 | molecular_function | catalytic activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0008360 | biological_process | regulation of cell shape |
C | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
C | 0009252 | biological_process | peptidoglycan biosynthetic process |
C | 0016874 | molecular_function | ligase activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0071555 | biological_process | cell wall organization |
D | 0003824 | molecular_function | catalytic activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0008360 | biological_process | regulation of cell shape |
D | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
D | 0009252 | biological_process | peptidoglycan biosynthetic process |
D | 0016874 | molecular_function | ligase activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA A 401 |
Chain | Residue |
A | ASP248 |
A | GLU260 |
A | ATP402 |
A | HOH706 |
site_id | AC2 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE ATP A 402 |
Chain | Residue |
A | LYS173 |
A | TYR174 |
A | ILE175 |
A | GLU179 |
A | MSE259 |
A | GLU260 |
A | ASN262 |
A | CA401 |
A | HOH573 |
A | HOH598 |
A | HOH687 |
A | HOH688 |
A | HOH706 |
A | LYS95 |
A | VAL134 |
A | LYS136 |
A | VAL146 |
A | GLU172 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CA B 401 |
Chain | Residue |
B | ASP248 |
B | GLU260 |
B | ATP402 |
site_id | AC4 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE ATP B 402 |
Chain | Residue |
B | GLU66 |
B | LYS95 |
B | VAL134 |
B | LYS136 |
B | GLY145 |
B | VAL146 |
B | GLU172 |
B | LYS173 |
B | TYR174 |
B | ILE175 |
B | GLU179 |
B | MSE250 |
B | MSE259 |
B | GLU260 |
B | ASN262 |
B | CA401 |
B | HOH651 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA B 403 |
Chain | Residue |
A | ASN31 |
A | HOH681 |
B | GLY281 |
B | HOH619 |
B | HOH620 |
B | HOH621 |
B | HOH622 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA C 401 |
Chain | Residue |
C | ARG246 |
C | ASP248 |
C | GLU260 |
C | ATP402 |
C | HOH616 |
site_id | AC7 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE ATP C 402 |
Chain | Residue |
C | LYS63 |
C | LYS95 |
C | VAL134 |
C | LYS136 |
C | VAL146 |
C | GLU172 |
C | LYS173 |
C | TYR174 |
C | ILE175 |
C | GLU179 |
C | MSE250 |
C | MSE259 |
C | GLU260 |
C | CA401 |
C | HOH616 |
C | HOH618 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA C 403 |
Chain | Residue |
A | PHE131 |
A | HOH629 |
A | HOH686 |
C | GLU108 |
C | HOH637 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG C 404 |
Chain | Residue |
C | ARG299 |
C | GLU302 |
C | HOH643 |
C | HOH644 |
C | HOH645 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA D 401 |
Chain | Residue |
A | ASP203 |
A | HOH525 |
D | ASP248 |
D | GLU260 |
D | ATP402 |
D | HOH660 |
site_id | BC2 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE ATP D 402 |
Chain | Residue |
D | GLU179 |
D | MSE250 |
D | MSE259 |
D | GLU260 |
D | ASN262 |
D | CA401 |
D | HOH527 |
D | HOH615 |
D | HOH625 |
D | HOH660 |
D | HOH677 |
D | HOH691 |
D | HOH700 |
A | PHE201 |
A | ASP203 |
A | HOH525 |
A | HOH569 |
A | HOH661 |
D | LYS95 |
D | VAL134 |
D | LYS136 |
D | VAL146 |
D | GLU172 |
D | LYS173 |
D | TYR174 |
D | ILE175 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA D 403 |
Chain | Residue |
A | ASP253 |
D | GLU200 |
D | ASP203 |
D | TYR208 |
D | HOH667 |
D | HOH668 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO D 404 |
Chain | Residue |
D | GLU75 |
D | ARG299 |
D | GLU302 |
D | PHE304 |
D | HOH726 |
site_id | BC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACY D 405 |
Chain | Residue |
D | ASP111 |
D | HOH623 |
Functional Information from PROSITE/UniProt
site_id | PS00843 |
Number of Residues | 12 |
Details | DALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGkyGEDGtVQG |
Chain | Residue | Details |
A | HIS61-GLY72 | |
site_id | PS00844 |
Number of Residues | 28 |
Details | DALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LkcsVyARVDMMvkdgipy.....VmEVNTlPG |
Chain | Residue | Details |
A | LEU239-GLY266 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | LEU126 | |
C | ASP248 | |
C | GLU260 | |
C | ASN262 | |
D | LEU126 | |
D | ASP248 | |
D | GLU260 | |
D | ASN262 | |
A | ASP248 | |
A | GLU260 | |
A | ASN262 | |
B | LEU126 | |
B | ASP248 | |
B | GLU260 | |
B | ASN262 | |
C | LEU126 | |