3R3S
Structure of the YghA Oxidoreductase from Salmonella enterica
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
| A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
| B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
| C | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0016614 | molecular_function | oxidoreductase activity, acting on CH-OH group of donors |
| D | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 34 |
| Details | BINDING SITE FOR RESIDUE NAD A 300 |
| Chain | Residue |
| A | ASP58 |
| A | LEU109 |
| A | VAL135 |
| A | ALA136 |
| A | GLY137 |
| A | VAL159 |
| A | SER185 |
| A | SER186 |
| A | TYR199 |
| A | LYS203 |
| A | PRO229 |
| A | SER59 |
| A | GLY230 |
| A | PRO231 |
| A | ILE232 |
| A | THR234 |
| A | LEU236 |
| A | GLN237 |
| A | FMT295 |
| A | MG296 |
| A | HOH297 |
| A | HOH301 |
| A | GLY60 |
| A | HOH305 |
| A | HOH319 |
| A | HOH331 |
| A | HOH439 |
| A | HOH1604 |
| A | ILE61 |
| A | TYR80 |
| A | LEU81 |
| A | GLU84 |
| A | GLY107 |
| A | ASP108 |
| site_id | AC2 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD B 300 |
| Chain | Residue |
| B | ASP58 |
| B | SER59 |
| B | GLY60 |
| B | ILE61 |
| B | TYR80 |
| B | LEU81 |
| B | GLU84 |
| B | GLY107 |
| B | ASP108 |
| B | LEU109 |
| B | VAL135 |
| B | ALA136 |
| B | GLY137 |
| B | VAL159 |
| B | SER185 |
| B | SER186 |
| B | TYR199 |
| B | LYS203 |
| B | PRO229 |
| B | GLY230 |
| B | PRO231 |
| B | ILE232 |
| B | THR234 |
| B | LEU236 |
| B | GLN237 |
| B | FMT295 |
| B | MG296 |
| B | HOH299 |
| B | HOH315 |
| B | HOH317 |
| B | HOH336 |
| B | HOH344 |
| B | HOH350 |
| site_id | AC3 |
| Number of Residues | 34 |
| Details | BINDING SITE FOR RESIDUE NAD C 300 |
| Chain | Residue |
| C | HOH323 |
| C | HOH1570 |
| C | ASP58 |
| C | SER59 |
| C | GLY60 |
| C | ILE61 |
| C | TYR80 |
| C | LEU81 |
| C | GLU84 |
| C | GLY107 |
| C | ASP108 |
| C | LEU109 |
| C | VAL135 |
| C | ALA136 |
| C | GLY137 |
| C | VAL159 |
| C | SER185 |
| C | SER186 |
| C | TYR199 |
| C | LYS203 |
| C | PRO229 |
| C | GLY230 |
| C | PRO231 |
| C | ILE232 |
| C | THR234 |
| C | LEU236 |
| C | GLN237 |
| C | FMT295 |
| C | MG296 |
| C | HOH297 |
| C | HOH301 |
| C | HOH311 |
| C | HOH316 |
| C | HOH318 |
| site_id | AC4 |
| Number of Residues | 34 |
| Details | BINDING SITE FOR RESIDUE NAD D 300 |
| Chain | Residue |
| D | ASP58 |
| D | SER59 |
| D | GLY60 |
| D | ILE61 |
| D | TYR80 |
| D | LEU81 |
| D | GLU84 |
| D | GLY107 |
| D | ASP108 |
| D | LEU109 |
| D | VAL135 |
| D | ALA136 |
| D | GLY137 |
| D | VAL159 |
| D | SER185 |
| D | SER186 |
| D | TYR199 |
| D | LYS203 |
| D | PRO229 |
| D | GLY230 |
| D | PRO231 |
| D | ILE232 |
| D | THR234 |
| D | LEU236 |
| D | GLN237 |
| D | FMT295 |
| D | MG296 |
| D | HOH297 |
| D | HOH299 |
| D | HOH313 |
| D | HOH320 |
| D | HOH337 |
| D | HOH370 |
| D | HOH888 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE FMT A 295 |
| Chain | Residue |
| A | GLN139 |
| A | SER186 |
| A | TYR199 |
| A | NAD300 |
| A | HOH405 |
| A | HOH439 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE FMT B 295 |
| Chain | Residue |
| B | GLN139 |
| B | SER186 |
| B | TYR199 |
| B | NAD300 |
| B | HOH344 |
| B | HOH675 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE FMT C 295 |
| Chain | Residue |
| C | GLN139 |
| C | SER186 |
| C | TYR199 |
| C | NAD300 |
| C | HOH301 |
| C | HOH399 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE FMT D 295 |
| Chain | Residue |
| D | SER186 |
| D | GLN188 |
| D | TYR199 |
| D | NAD300 |
| D | HOH370 |
| D | HOH393 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 296 |
| Chain | Residue |
| A | ASP58 |
| A | SER59 |
| A | GLU84 |
| A | HOH297 |
| A | HOH298 |
| A | NAD300 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B 296 |
| Chain | Residue |
| B | ASP58 |
| B | SER59 |
| B | GLU84 |
| B | HOH299 |
| B | NAD300 |
| B | HOH301 |
| site_id | BC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG C 296 |
| Chain | Residue |
| C | ASP58 |
| C | SER59 |
| C | GLU84 |
| C | HOH297 |
| C | NAD300 |
| C | HOH303 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG D 296 |
| Chain | Residue |
| D | ASP58 |
| D | SER59 |
| D | GLU84 |
| D | HOH297 |
| D | HOH298 |
| D | NAD300 |
| site_id | BC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 297 |
| Chain | Residue |
| B | GLN90 |
| B | HOH569 |
| B | HOH769 |
| B | HOH834 |
Functional Information from PROSITE/UniProt
| site_id | PS00061 |
| Number of Residues | 29 |
| Details | ADH_SHORT Short-chain dehydrogenases/reductases family signature. SiqayqpsphLldYAATKAAIlNYSrGLA |
| Chain | Residue | Details |
| A | SER186-ALA214 |
