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3QHT

Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO

Functional Information from GO Data
ChainGOidnamespacecontents
A0000794cellular_componentcondensed nuclear chromosome
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005940cellular_componentseptin ring
A0016925biological_processprotein sumoylation
A0031386molecular_functionprotein tag activity
A0042802molecular_functionidentical protein binding
A0044389molecular_functionubiquitin-like protein ligase binding
B0000794cellular_componentcondensed nuclear chromosome
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005940cellular_componentseptin ring
B0016925biological_processprotein sumoylation
B0031386molecular_functionprotein tag activity
B0042802molecular_functionidentical protein binding
B0044389molecular_functionubiquitin-like protein ligase binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 99
ChainResidue
AGLU21
AHIS23
AASN25
ALYS38
AASP85
CGLU47

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 100
ChainResidue
AHOH107
CSER86
ASER32
ASER33
AGLU34

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 101
ChainResidue
ATYR67
AASP68
AASP87
AILE88
CSER25
CHOH118

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 102
ChainResidue
AASP68
AILE70
DTHR49

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 103
ChainResidue
AASP75
AHOH116
AHOH117
DTYR78
DTYR79

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C 95
ChainResidue
BASP75
CGLY41
CTYR78
CTYR79
CHOH100

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL C 96
ChainResidue
AHOH109
CPRO5
CTHR6
CASP23
CALA24
CSER25
CSER26
CTYR32
CHOH116

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL C 97
ChainResidue
CASN91
CTYR92
CARG93

Functional Information from PROSITE/UniProt
site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GETGGNSP
ChainResidueDetails
CGLY37-PRO44

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358, ECO:0007744|PubMed:17330950
ChainResidueDetails
ASER2
BSER2

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358
ChainResidueDetails
ASER4
BSER4

site_idSWS_FT_FI3
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
AGLY98
BGLY98

221716

PDB entries from 2024-06-26

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