Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3QGK

3.0 A Model of Iron Containing Urease UreA2B2 from Helicobacter mustelae (refined w/ no ordered solvent)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0009039	molecular_function	urease activity
A	0016151	molecular_function	nickel cation binding
A	0016787	molecular_function	hydrolase activity
A	0035550	cellular_component	urease complex
A	0042802	molecular_function	identical protein binding
A	0043419	biological_process	urea catabolic process
C	0005515	molecular_function	protein binding
C	0005737	cellular_component	cytoplasm
C	0009039	molecular_function	urease activity
C	0016151	molecular_function	nickel cation binding
C	0016787	molecular_function	hydrolase activity
C	0016810	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
C	0019627	biological_process	urea metabolic process
C	0043419	biological_process	urea catabolic process
C	0046872	molecular_function	metal ion binding
D	0005515	molecular_function	protein binding
D	0009039	molecular_function	urease activity
D	0016151	molecular_function	nickel cation binding
D	0016787	molecular_function	hydrolase activity
D	0035550	cellular_component	urease complex
D	0042802	molecular_function	identical protein binding
D	0043419	biological_process	urea catabolic process
F	0005515	molecular_function	protein binding
F	0005737	cellular_component	cytoplasm
F	0009039	molecular_function	urease activity
F	0016151	molecular_function	nickel cation binding
F	0016787	molecular_function	hydrolase activity
F	0016810	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
F	0019627	biological_process	urea metabolic process
F	0043419	biological_process	urea catabolic process
F	0046872	molecular_function	metal ion binding
G	0005515	molecular_function	protein binding
G	0009039	molecular_function	urease activity
G	0016151	molecular_function	nickel cation binding
G	0016787	molecular_function	hydrolase activity
G	0035550	cellular_component	urease complex
G	0042802	molecular_function	identical protein binding
G	0043419	biological_process	urea catabolic process
I	0005515	molecular_function	protein binding
I	0005737	cellular_component	cytoplasm
I	0009039	molecular_function	urease activity
I	0016151	molecular_function	nickel cation binding
I	0016787	molecular_function	hydrolase activity
I	0016810	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
I	0019627	biological_process	urea metabolic process
I	0043419	biological_process	urea catabolic process
I	0046872	molecular_function	metal ion binding
J	0005515	molecular_function	protein binding
J	0009039	molecular_function	urease activity
J	0016151	molecular_function	nickel cation binding
J	0016787	molecular_function	hydrolase activity
J	0035550	cellular_component	urease complex
J	0042802	molecular_function	identical protein binding
J	0043419	biological_process	urea catabolic process
L	0005515	molecular_function	protein binding
L	0005737	cellular_component	cytoplasm
L	0009039	molecular_function	urease activity
L	0016151	molecular_function	nickel cation binding
L	0016787	molecular_function	hydrolase activity
L	0016810	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
L	0019627	biological_process	urea metabolic process
L	0043419	biological_process	urea catabolic process
L	0046872	molecular_function	metal ion binding
M	0005515	molecular_function	protein binding
M	0009039	molecular_function	urease activity
M	0016151	molecular_function	nickel cation binding
M	0016787	molecular_function	hydrolase activity
M	0035550	cellular_component	urease complex
M	0042802	molecular_function	identical protein binding
M	0043419	biological_process	urea catabolic process
O	0005515	molecular_function	protein binding
O	0005737	cellular_component	cytoplasm
O	0009039	molecular_function	urease activity
O	0016151	molecular_function	nickel cation binding
O	0016787	molecular_function	hydrolase activity
O	0016810	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
O	0019627	biological_process	urea metabolic process
O	0043419	biological_process	urea catabolic process
O	0046872	molecular_function	metal ion binding
P	0005515	molecular_function	protein binding
P	0009039	molecular_function	urease activity
P	0016151	molecular_function	nickel cation binding
P	0016787	molecular_function	hydrolase activity
P	0035550	cellular_component	urease complex
P	0042802	molecular_function	identical protein binding
P	0043419	biological_process	urea catabolic process
R	0005515	molecular_function	protein binding
R	0005737	cellular_component	cytoplasm
R	0009039	molecular_function	urease activity
R	0016151	molecular_function	nickel cation binding
R	0016787	molecular_function	hydrolase activity
R	0016810	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
R	0019627	biological_process	urea metabolic process
R	0043419	biological_process	urea catabolic process
R	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE FE C 774

Chain	Residue
C	KCX218
C	HIS220
C	HIS247
C	HIS273
C	GLY278
C	FE775

site_id	AC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE C 775

Chain	Residue
C	ASP361
C	FE774
C	HIS135
C	HIS137
C	KCX218

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE F 774

Chain	Residue
F	KCX218
F	HIS220
F	HIS247
F	HIS273
F	FE775

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE F 775

Chain	Residue
F	HIS135
F	HIS137
F	KCX218
F	ASP361
F	FE774

site_id	AC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE FE I 774

Chain	Residue
I	KCX218
I	HIS220
I	HIS247
I	HIS273
I	GLY278
I	FE775

site_id	AC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE I 775

Chain	Residue
I	HIS135
I	HIS137
I	KCX218
I	ASP361
I	FE774

site_id	AC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE L 774

Chain	Residue
L	KCX218
L	HIS220
L	HIS247
L	HIS273
L	FE775

site_id	AC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE L 775

Chain	Residue
L	HIS135
L	HIS137
L	KCX218
L	ASP361
L	FE774

site_id	AC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE FE O 774

Chain	Residue
O	KCX218
O	HIS220
O	HIS247
O	HIS273
O	GLY278
O	FE775

site_id	BC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE O 775

Chain	Residue
O	HIS135
O	HIS137
O	KCX218
O	ASP361
O	FE774

site_id	BC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE R 774

Chain	Residue
R	KCX218
R	HIS220
R	HIS247
R	HIS273
R	FE775

site_id	BC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE R 775

Chain	Residue
R	HIS135
R	HIS137
R	KCX218
R	ASP361
R	FE774

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)