3QGG
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003723 | molecular_function | RNA binding |
A | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
A | 0039694 | biological_process | viral RNA genome replication |
B | 0003723 | molecular_function | RNA binding |
B | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
B | 0039694 | biological_process | viral RNA genome replication |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE 23E A 601 |
Chain | Residue |
A | LEU392 |
A | ARG498 |
A | VAL499 |
A | ARG503 |
B | 23E601 |
A | ALA393 |
A | ALA395 |
A | ALA396 |
A | HIS428 |
A | LEU492 |
A | GLY493 |
A | VAL494 |
A | PRO495 |
site_id | AC2 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE 23E B 601 |
Chain | Residue |
A | THR399 |
A | ALA400 |
A | ARG401 |
A | 23E601 |
B | LEU392 |
B | ALA393 |
B | HIS428 |
B | LEU492 |
B | GLY493 |
B | VAL494 |
B | PRO495 |
B | PRO496 |
B | ARG498 |
B | VAL499 |
B | ARG503 |
site_id | AC3 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE 63F A 602 |
Chain | Residue |
A | VAL179 |
A | TYR191 |
A | PHE193 |
A | TYR195 |
A | SER196 |
A | PRO197 |
A | ARG200 |
A | SER288 |
A | CYS289 |
A | SER368 |
A | MET414 |
A | TYR415 |
A | ILE447 |
A | TYR448 |
A | GLY449 |
A | TYR452 |
A | ILE454 |
A | ILE462 |
A | LEU466 |
A | LEU547 |
A | TRP550 |
A | TYR555 |
site_id | AC4 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE 63F B 602 |
Chain | Residue |
B | VAL179 |
B | TYR191 |
B | PHE193 |
B | TYR195 |
B | SER196 |
B | PRO197 |
B | ARG200 |
B | SER288 |
B | CYS289 |
B | SER368 |
B | LEU384 |
B | MET414 |
B | TYR415 |
B | ILE447 |
B | TYR448 |
B | GLY449 |
B | TYR452 |
B | ILE454 |
B | ILE462 |
B | LEU466 |
B | LEU547 |
B | TRP550 |
B | TYR555 |
B | SER556 |
site_id | AC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 652 |
Chain | Residue |
A | ARG48 |
A | CYS223 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 653 |
Chain | Residue |
A | HIS374 |
A | ARG380 |
A | ARG517 |
site_id | AC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE SO4 B 651 |
site_id | AC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 B 657 |
Chain | Residue |
B | HIS475 |
B | SER476 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 652 |
Chain | Residue |
B | ARG48 |
B | LYS51 |
B | CYS223 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 659 |
Chain | Residue |
A | THR329 |
A | ARG505 |
A | VAL530 |
A | ARG531 |
A | THR532 |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | ASP220 | |
A | ASP318 | |
A | ASP319 | |
B | ASP220 | |
B | ASP318 | |
B | ASP319 | |
Chain | Residue | Details |
A | SER29 | |
A | SER42 | |
B | SER29 | |
B | SER42 | |