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3Q0Z

Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5h-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003968molecular_functionRNA-directed RNA polymerase activity
A0039694biological_processviral RNA genome replication
B0003723molecular_functionRNA binding
B0003968molecular_functionRNA-directed RNA polymerase activity
B0039694biological_processviral RNA genome replication
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 23E A 601
ChainResidue
ALEU392
APRO496
AARG498
AVAL499
AARG503
B23E601
BHOH717
AALA395
AALA396
AILE424
AHIS428
ALEU492
AGLY493
AVAL494
APRO495

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 651
ChainResidue
ASER84
AVAL85
AARG120
AHOH757
AHOH763

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 652
ChainResidue
AARG48
ALYS51
ATHR221
AARG222
ACYS223
AHOH808

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 653
ChainResidue
AHIS374
ASER476
AGLY516
AARG517
AHOH760

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 654
ChainResidue
APRO496
ALEU497
AARG498
AARG570
AHOH803

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 655
ChainResidue
ASER371
ASER478
ALYS523
AHOH849
AHOH944

site_idAC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE 23E B 601
ChainResidue
AALA400
AARG401
AHIS428
A23E601
BLEU392
BALA395
BALA396
BILE424
BHIS428
BLEU492
BGLY493
BVAL494
BPRO495
BPRO496
BARG498
BARG503
BHOH717
BHOH794

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 651
ChainResidue
BSER84
BVAL85
BARG120
BHOH854

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 652
ChainResidue
BARG48
BLYS51
BCYS223

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 653
ChainResidue
BGLY516
BARG517
BHOH824

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 656
ChainResidue
ASER1
BLYS379
BARG380
BHOH846

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 657
ChainResidue
BHIS475
BSER476
BHOH783

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues236
DetailsDomain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P26663","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by host","evidences":[{"source":"UniProtKB","id":"P26662","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

249524

PDB entries from 2026-02-18

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