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3PW7

Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dCTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
E0000287molecular_functionmagnesium ion binding
E0003677molecular_functionDNA binding
E0003684molecular_functiondamaged DNA binding
E0003887molecular_functionDNA-directed DNA polymerase activity
E0005737cellular_componentcytoplasm
E0006260biological_processDNA replication
E0006261biological_processDNA-templated DNA replication
E0006281biological_processDNA repair
E0006974biological_processDNA damage response
E0042276biological_processerror-prone translesion synthesis
E0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE DCP A 400
ChainResidue
AASP10
ACA345
AHOH500
AHOH501
AHOH502
AHOH505
CDT358
CHOH500
APHE11
ATYR13
APHE14
AARG54
ASER106
AASP108
AGLU109
ALYS162

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 345
ChainResidue
ATYR51
AARG54
ALYS162
ADCP400

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DCP E 400
ChainResidue
EASP10
EPHE11
ESER106
EASP108
EGLU109
ELYS162
EHOH524
EHOH528
EHOH529
EHOH530
EHOH531
GDT358

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CA E 345
ChainResidue
EALA184
EILE189

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU109
EGLU109

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AASP10
AASP108
EASP10
EASP108

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Substrate discrimination
ChainResidueDetails
ATYR15
ETYR15

224004

PDB entries from 2024-08-21

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