3PVQ
Crystal structure of a putative dipeptidyl-peptidase VI (BT_1314) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000270 | biological_process | peptidoglycan metabolic process |
| A | 0004175 | molecular_function | endopeptidase activity |
| A | 0006508 | biological_process | proteolysis |
| A | 0008233 | molecular_function | peptidase activity |
| A | 0008234 | molecular_function | cysteine-type peptidase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| B | 0000270 | biological_process | peptidoglycan metabolic process |
| B | 0004175 | molecular_function | endopeptidase activity |
| B | 0006508 | biological_process | proteolysis |
| B | 0008233 | molecular_function | peptidase activity |
| B | 0008234 | molecular_function | cysteine-type peptidase activity |
| B | 0016787 | molecular_function | hydrolase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 330 |
| Chain | Residue |
| A | ASN42 |
| A | ARG44 |
| A | HOH423 |
| B | TRP193 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 331 |
| Chain | Residue |
| A | ASP221 |
| A | HOH400 |
| A | SER54 |
| A | TYR80 |
| A | ASP202 |
| A | SER204 |
| A | ARG220 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 334 |
| Chain | Residue |
| A | ASP79 |
| A | LEU323 |
| A | HOH388 |
| A | HOH445 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 335 |
| Chain | Residue |
| A | LYS64 |
| A | GLN75 |
| A | ASP79 |
| A | TYR324 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL B 329 |
| Chain | Residue |
| A | TRP193 |
| B | ASN42 |
| B | ARG44 |
| B | HOH532 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 332 |
| Chain | Residue |
| B | SER54 |
| B | ALA194 |
| B | ASP202 |
| B | SER204 |
| B | ARG220 |
| B | ASP221 |
| B | HOH424 |
| B | HOH772 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 333 |
| Chain | Residue |
| B | ASP79 |
| B | ASN322 |
| B | LEU323 |
| B | HOH414 |
| B | HOH538 |
