3PU0

Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyC complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0005515	molecular_function	protein binding
A	0019013	cellular_component	viral nucleocapsid
A	0019028	cellular_component	viral capsid
A	0019029	cellular_component	helical viral capsid
A	0019083	biological_process	viral transcription
A	0030430	cellular_component	host cell cytoplasm
A	0039703	biological_process	RNA replication
A	0044423	cellular_component	virion component
A	1990904	cellular_component	ribonucleoprotein complex
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0019013	cellular_component	viral nucleocapsid
B	0019028	cellular_component	viral capsid
B	0019029	cellular_component	helical viral capsid
B	0019083	biological_process	viral transcription
B	0030430	cellular_component	host cell cytoplasm
B	0039703	biological_process	RNA replication
B	0044423	cellular_component	virion component
B	1990904	cellular_component	ribonucleoprotein complex
C	0003723	molecular_function	RNA binding
C	0005515	molecular_function	protein binding
C	0019013	cellular_component	viral nucleocapsid
C	0019028	cellular_component	viral capsid
C	0019029	cellular_component	helical viral capsid
C	0019083	biological_process	viral transcription
C	0030430	cellular_component	host cell cytoplasm
C	0039703	biological_process	RNA replication
C	0044423	cellular_component	virion component
C	1990904	cellular_component	ribonucleoprotein complex
D	0003723	molecular_function	RNA binding
D	0005515	molecular_function	protein binding
D	0019013	cellular_component	viral nucleocapsid
D	0019028	cellular_component	viral capsid
D	0019029	cellular_component	helical viral capsid
D	0019083	biological_process	viral transcription
D	0030430	cellular_component	host cell cytoplasm
D	0039703	biological_process	RNA replication
D	0044423	cellular_component	virion component
D	1990904	cellular_component	ribonucleoprotein complex
E	0003723	molecular_function	RNA binding
E	0005515	molecular_function	protein binding
E	0019013	cellular_component	viral nucleocapsid
E	0019028	cellular_component	viral capsid
E	0019029	cellular_component	helical viral capsid
E	0019083	biological_process	viral transcription
E	0030430	cellular_component	host cell cytoplasm
E	0039703	biological_process	RNA replication
E	0044423	cellular_component	virion component
E	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM A 521

Chain	Residue
A	ASP123
A	GLU377

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site_id	AC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IUM A 522

Chain	Residue
A	GLU253
A	GLU323
B	ASP343

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site_id	AC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM A 523

Chain	Residue
A	ASP358
E	ASP384

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site_id	AC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM B 524

Chain	Residue
A	ASP384
B	ASP358

---

site_id	AC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM B 525

Chain	Residue
B	ASP123
B	GLU377

---

site_id	AC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IUM B 526

Chain	Residue
B	GLU253
B	GLU323
C	ASP343

---

site_id	AC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IUM B 527

Chain	Residue
B	ASP384

---

site_id	AC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM C 528

Chain	Residue
C	ASP123
C	GLU377

---

site_id	AC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IUM C 529

Chain	Residue
C	GLU253
C	GLU323
D	ASP343

---

site_id	BC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM D 530

Chain	Residue
C	ASP384
D	ASP358

---

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM D 531

Chain	Residue
D	ASP123
D	GLU377

---

site_id	BC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IUM D 532

Chain	Residue
D	GLU253
D	GLU323
E	ASP343

---

site_id	BC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM E 533

Chain	Residue
E	ASP123
E	ASP374

---

site_id	BC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IUM E 534

Chain	Residue
A	ASP343
E	GLU253
E	GLU323

---

site_id	BC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM E 535

Chain	Residue
D	ASP384
E	ASP358

---

site_id	BC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IUM R 536

Chain	Residue
R	C6

---

site_id	BC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IUM R 537

Chain	Residue
R	C15

---

site_id	BC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IUM R 538

Chain	Residue
R	C24

---

site_id	CC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM R 539

Chain	Residue
R	C32
R	C33

---

site_id	CC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IUM R 540

Chain	Residue
R	C40
R	C42

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	80
Details	Region: {"description":"Interaction with the phosphoprotein","evidences":[{"source":"PubMed","id":"28396572","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	35
Details	Binding site: {"evidences":[{"source":"PubMed","id":"35970826","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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