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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3PNZ

Crystal structure of the lactonase Lmo2620 from Listeria monocytogenes

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0008270	molecular_function	zinc ion binding
A	0009056	biological_process	catabolic process
B	0008270	molecular_function	zinc ion binding
B	0009056	biological_process	catabolic process
C	0008270	molecular_function	zinc ion binding
C	0009056	biological_process	catabolic process
D	0008270	molecular_function	zinc ion binding
D	0009056	biological_process	catabolic process
E	0008270	molecular_function	zinc ion binding
E	0009056	biological_process	catabolic process
F	0008270	molecular_function	zinc ion binding
F	0009056	biological_process	catabolic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL C 331

Chain	Residue
C	PRO207
C	LEU208
C	GLU209
C	THR231
C	HOH1498

site_id	AC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE GOL D 331

Chain	Residue
D	TYR8
D	TYR148

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL B 331

Chain	Residue
B	THR327
B	LYS329
B	HOH1532
B	GLU209
B	ARG324

site_id	AC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL F 331

Chain	Residue
F	TYR8
F	SER82
F	GLY86
F	GLN88
F	HOH605
F	HOH864

site_id	AC5
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL C 332

Chain	Residue
A	HOH498
C	ILE240
C	ALA241
C	GLY271
C	THR273
C	TYR278
C	GLY287
C	HOH730

site_id	AC6
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL E 331

Chain	Residue
B	HOH589
E	ILE240
E	ALA241
E	GLY271
E	THR273
E	TYR278
E	GLY287
E	HOH977

site_id	AC7
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL D 332

Chain	Residue
D	ILE240
D	ALA241
D	GLY271
D	THR273
D	TYR278
D	GLY287
D	HOH379
D	HOH571

site_id	AC8
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL F 332

Chain	Residue
F	GLY271
F	THR273
F	TYR278
F	PRO286
F	GLY287
F	HOH386
F	HOH518

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL E 332

Chain	Residue
E	ASP43
E	ARG74
E	ASP77
E	HOH579

site_id	BC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL C 333

Chain	Residue
C	PHE18
C	LEU58
C	ALA292
C	HOH1191

site_id	BC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL E 333

Chain	Residue
E	LYS226
E	LYS230
E	HOH834
E	HOH930
E	HOH1503

site_id	BC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE GOL C 334

Chain	Residue
C	GLU189

site_id	BC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE GOL A 331

Chain	Residue
A	LEU58
A	ALA292
A	HOH953

site_id	BC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL E 334

Chain	Residue
E	ILE198
E	LYS202
E	HOH393
E	HOH395

site_id	BC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL C 335

Chain	Residue
C	LYS226
C	LYS230
C	HOH822
C	HOH995
C	HOH1270

site_id	BC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL B 332

Chain	Residue
B	PHE18
B	LEU58
B	GLY59
B	ALA292
B	HOH908

site_id	BC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE GOL C 336

Chain	Residue
C	LYS312
C	LYS316

site_id	BC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL F 333

Chain	Residue
F	PHE18
F	LEU58
F	ALA292
F	HOH1440

site_id	CC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL B 333

Chain	Residue
B	TYR223
B	LYS226
B	GLN227
B	LYS230
B	HOH978

site_id	CC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 332

Chain	Residue
A	GLU209
A	ARG324
A	LYS329
A	HOH691
E	PRO147
E	TYR148
E	HOH1495

site_id	CC3
Number of Residues	10
Details	BINDING SITE FOR RESIDUE GOL D 333

Chain	Residue
D	SER82
D	LYS83
D	GLY86
D	ILE87
D	GLN88
D	HOH598
D	HOH896
D	HOH1193
D	HOH1467
D	TYR8

site_id	CC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN A 333

Chain	Residue
A	HIS22
A	HIS24
A	KCX154
A	ASP272
A	PO4335

site_id	CC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN B 334

Chain	Residue
B	HIS22
B	HIS24
B	KCX154
B	ASP272
B	PO4336

site_id	CC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN C 337

Chain	Residue
C	HIS22
C	HIS24
C	KCX154
C	ASP272
C	PO4339

site_id	CC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN D 334

Chain	Residue
D	HIS22
D	HIS24
D	KCX154
D	ASP272
D	PO4336

site_id	CC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN E 335

Chain	Residue
E	HIS22
E	HIS24
E	KCX154
E	ASP272
E	PO4337

site_id	CC9
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN F 334

Chain	Residue
F	HIS22
F	HIS24
F	KCX154
F	ASP272
F	PO4336

site_id	DC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN A 334

Chain	Residue
A	ASN96
A	KCX154
A	HIS187
A	HIS215
A	PO4335

site_id	DC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ZN B 335

Chain	Residue
B	ASN96
B	KCX154
B	HIS187
B	HIS215
B	PO4336

site_id	DC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN C 338

Chain	Residue
C	KCX154
C	HIS187
C	HIS215
C	PO4339

site_id	DC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN D 335

Chain	Residue
D	KCX154
D	HIS187
D	HIS215
D	PO4336

site_id	DC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN E 336

Chain	Residue
E	KCX154
E	HIS187
E	HIS215
E	PO4337

site_id	DC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN F 335

Chain	Residue
F	KCX154
F	HIS187
F	HIS215
F	PO4336

site_id	DC7
Number of Residues	11
Details	BINDING SITE FOR RESIDUE PO4 A 335

Chain	Residue
A	HIS22
A	HIS24
A	TYR71
A	ASN96
A	LYS97
A	KCX154
A	HIS187
A	HIS215
A	ASP272
A	ZN333
A	ZN334

site_id	DC8
Number of Residues	11
Details	BINDING SITE FOR RESIDUE PO4 B 336

Chain	Residue
B	HIS22
B	HIS24
B	TYR71
B	ASN96
B	LYS97
B	KCX154
B	HIS187
B	HIS215
B	ASP272
B	ZN334
B	ZN335

site_id	DC9
Number of Residues	13
Details	BINDING SITE FOR RESIDUE PO4 C 339

Chain	Residue
C	HIS22
C	HIS24
C	TYR71
C	ASN96
C	LYS97
C	KCX154
C	HIS187
C	HIS215
C	ASP272
C	ZN337
C	ZN338
C	HOH974
C	HOH1550

site_id	EC1
Number of Residues	11
Details	BINDING SITE FOR RESIDUE PO4 D 336

Chain	Residue
D	HIS22
D	HIS24
D	ASN96
D	LYS97
D	KCX154
D	HIS187
D	HIS215
D	ASP272
D	ZN334
D	ZN335
D	HOH1139

site_id	EC2
Number of Residues	13
Details	BINDING SITE FOR RESIDUE PO4 E 337

Chain	Residue
E	HIS22
E	HIS24
E	TYR71
E	ASN96
E	LYS97
E	KCX154
E	HIS187
E	HIS215
E	ASP272
E	ZN335
E	ZN336
E	HOH1012
E	HOH1548

site_id	EC3
Number of Residues	12
Details	BINDING SITE FOR RESIDUE PO4 F 336

Chain	Residue
F	HIS22
F	HIS24
F	TYR71
F	ASN96
F	LYS97
F	KCX154
F	HIS187
F	HIS215
F	ASP272
F	ZN334
F	ZN335
F	HOH968

site_id	EC4
Number of Residues	8
Details	BINDING SITE FOR RESIDUE PO4 A 336

Chain	Residue
A	LYS242
A	LYS244
A	TYR245
A	ARG275
A	TYR278
A	HOH1049
A	HOH1102
A	HOH1143

site_id	EC5
Number of Residues	8
Details	BINDING SITE FOR RESIDUE PO4 B 337

Chain	Residue
B	LYS242
B	LYS244
B	TYR245
B	ARG275
B	TYR278
B	HOH1071
B	HOH1105
B	HOH1333

site_id	EC6
Number of Residues	9
Details	BINDING SITE FOR RESIDUE PO4 C 340

Chain	Residue
C	LYS242
C	LYS244
C	TYR245
C	ARG275
C	TYR278
C	HOH809
C	HOH951
C	HOH974
C	HOH1103

site_id	EC7
Number of Residues	7
Details	BINDING SITE FOR RESIDUE PO4 D 337

Chain	Residue
D	LYS242
D	LYS244
D	TYR245
D	ARG275
D	TYR278
D	HOH935
D	HOH1139

site_id	EC8
Number of Residues	9
Details	BINDING SITE FOR RESIDUE PO4 E 338

Chain	Residue
E	LYS242
E	LYS244
E	TYR245
E	ARG275
E	TYR278
E	HOH980
E	HOH990
E	HOH1012
E	HOH1500

site_id	EC9
Number of Residues	9
Details	BINDING SITE FOR RESIDUE PO4 F 337

Chain	Residue
F	LYS242
F	LYS244
F	TYR245
F	ARG275
F	TYR278
F	HOH898
F	HOH968
F	HOH1055
F	HOH1428

site_id	FC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 D 338

Chain	Residue
D	THR127
D	THR128
D	HOH1014

site_id	FC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 C 341

Chain	Residue
C	THR127
C	THR128
C	HOH714

site_id	FC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 E 339

Chain	Residue
E	THR127
E	THR128
E	HOH773

site_id	FC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE PO4 B 338

Chain	Residue
B	THR128
B	LYS168
B	HOH1509
B	HOH1539

site_id	FC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE PO4 F 338

Chain	Residue
F	THR127
F	THR128
F	HOH945
F	HOH1520

site_id	FC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 A 337

Chain	Residue
A	THR127
A	THR128
A	HOH1513

site_id	FC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 E 340

Chain	Residue
E	SER82
E	GLY86
E	GLN88
E	HOH356
E	HOH421
E	HOH928

site_id	FC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 E 341

Chain	Residue
E	LYS312
E	LYS316
E	HOH933

site_id	FC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 C 342

Chain	Residue
C	SER82
C	GLY86
C	ILE87
C	HOH419
C	HOH916
C	HOH1371

245663

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