3PMS
Recombinant peptide: N-glycanase F (PNGase F)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000224 | molecular_function | peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0016715 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE SO4 A 324 |
| Chain | Residue |
| A | LYS41 |
| A | HOH639 |
| A | PRO138 |
| A | ASP139 |
| A | TYR140 |
| A | LYS302 |
| A | HOH463 |
| A | HOH487 |
| A | HOH556 |
| A | HOH622 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 A 325 |
| Chain | Residue |
| A | GLY200 |
| A | THR272 |
| A | HOH358 |
| A | HOH726 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 326 |
| Chain | Residue |
| A | ASP60 |
| A | TYR85 |
| A | ASN243 |
| A | GOL335 |
| A | HOH417 |
| A | HOH491 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL A 327 |
| Chain | Residue |
| A | THR32 |
| A | ASN110 |
| A | HOH380 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 328 |
| Chain | Residue |
| A | TYR161 |
| A | GLY162 |
| A | GLN280 |
| A | ASN281 |
| A | TRP282 |
| A | HOH418 |
| A | HOH617 |
| A | HOH695 |
| site_id | AC6 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL A 329 |
| Chain | Residue |
| A | GLN174 |
| A | LEU175 |
| A | PRO176 |
| A | THR177 |
| A | ARG202 |
| A | PRO246 |
| A | SER308 |
| A | HOH408 |
| A | HOH649 |
| A | HOH696 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 330 |
| Chain | Residue |
| A | LEU229 |
| A | MET255 |
| A | HOH383 |
| A | HOH502 |
| A | HOH716 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 331 |
| Chain | Residue |
| A | PRO138 |
| A | LYS141 |
| A | ILE156 |
| A | ASN304 |
| A | HOH499 |
| A | HOH628 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 332 |
| Chain | Residue |
| A | ARG61 |
| A | GLU118 |
| A | SER155 |
| A | TRP191 |
| A | GOL335 |
| A | HOH495 |
| A | HOH628 |
| site_id | BC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 333 |
| Chain | Residue |
| A | LYS181 |
| A | TYR183 |
| A | HOH403 |
| A | HOH452 |
| A | HOH487 |
| A | HOH605 |
| A | HOH619 |
| site_id | BC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 334 |
| Chain | Residue |
| A | LYS10 |
| A | LYS48 |
| A | ARG94 |
| A | ASP130 |
| A | HOH512 |
| A | HOH689 |
| A | HOH732 |
| A | HOH737 |
| site_id | BC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 335 |
| Chain | Residue |
| A | ASP60 |
| A | TRP191 |
| A | GLU206 |
| A | GOL326 |
| A | GOL332 |
| A | HOH467 |
| A | HOH495 |
| site_id | BC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT A 336 |
| Chain | Residue |
| A | ASP132 |
| A | VAL134 |
| A | HOH691 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT A 337 |
| Chain | Residue |
| A | GLN174 |
| A | GLY200 |
| A | SER201 |
| A | HOH707 |
