Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3PM9

Crystal structure of a Putative dehydrogenase (RPA1076) from Rhodopseudomonas palustris CGA009 at 2.57 A resolution

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0003824	molecular_function	catalytic activity
A	0016491	molecular_function	oxidoreductase activity
A	0050660	molecular_function	flavin adenine dinucleotide binding
A	0071949	molecular_function	FAD binding
B	0000166	molecular_function	nucleotide binding
B	0003824	molecular_function	catalytic activity
B	0016491	molecular_function	oxidoreductase activity
B	0050660	molecular_function	flavin adenine dinucleotide binding
B	0071949	molecular_function	FAD binding
C	0000166	molecular_function	nucleotide binding
C	0003824	molecular_function	catalytic activity
C	0016491	molecular_function	oxidoreductase activity
C	0050660	molecular_function	flavin adenine dinucleotide binding
C	0071949	molecular_function	FAD binding
D	0000166	molecular_function	nucleotide binding
D	0003824	molecular_function	catalytic activity
D	0016491	molecular_function	oxidoreductase activity
D	0050660	molecular_function	flavin adenine dinucleotide binding
D	0071949	molecular_function	FAD binding
E	0000166	molecular_function	nucleotide binding
E	0003824	molecular_function	catalytic activity
E	0016491	molecular_function	oxidoreductase activity
E	0050660	molecular_function	flavin adenine dinucleotide binding
E	0071949	molecular_function	FAD binding
F	0000166	molecular_function	nucleotide binding
F	0003824	molecular_function	catalytic activity
F	0016491	molecular_function	oxidoreductase activity
F	0050660	molecular_function	flavin adenine dinucleotide binding
F	0071949	molecular_function	FAD binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	34
Details	BINDING SITE FOR RESIDUE FAD A 476

Chain	Residue
A	PRO79
A	GLN90
A	LEU101
A	ALA121
A	LEU143
A	GLY144
A	ALA145
A	CYS149
A	THR150
A	GLY153
A	ASN154
A	GLN80
A	SER156
A	THR157
A	ALA159
A	GLY160
A	GLU210
A	GLY211
A	GLY214
A	ILE215
A	ILE216
A	GLU433
A	GLY81
A	ASN470
A	HOH533
A	HOH632
A	HOH686
A	HOH979
A	GLY82
A	ASN83
A	THR84
A	GLY85
A	LEU86
A	GLY89

site_id	AC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 A 478

Chain	Residue
A	THR60
A	ARG108
A	GLU178
A	HOH849
A	HOH1414

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 A 484

Chain	Residue
A	LYS352
A	HIS353
A	ASP354
A	HIS434
A	LYS440

site_id	AC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 A 490

Chain	Residue
A	SER341
A	GLN344
A	LYS352
A	PHE385
A	HIS394
A	ASN396

site_id	AC5
Number of Residues	32
Details	BINDING SITE FOR RESIDUE FAD B 476

Chain	Residue
B	GLU43
B	PRO79
B	GLN80
B	GLY81
B	GLY82
B	ASN83
B	THR84
B	GLY85
B	GLY89
B	GLN90
B	LEU101
B	ALA121
B	ALA145
B	CYS149
B	THR150
B	GLY152
B	GLY153
B	ASN154
B	SER156
B	THR157
B	ALA159
B	GLY160
B	GLU210
B	GLY211
B	GLY214
B	ILE216
B	GLU433
B	ASN470
B	HOH523
B	HOH542
B	HOH766
B	HOH810

site_id	AC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 B 479

Chain	Residue
B	THR60
B	ARG108
B	GLU178
B	HOH1130
B	HOH1172

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 B 485

Chain	Residue
B	ASP354
B	HIS434
B	LYS440

site_id	AC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 B 491

Chain	Residue
B	SER341
B	GLN344
B	LYS352
B	PHE385
B	ASN396

site_id	AC9
Number of Residues	33
Details	BINDING SITE FOR RESIDUE FAD C 476

Chain	Residue
C	ASN83
C	THR84
C	GLY85
C	LEU86
C	GLY89
C	GLN90
C	LEU101
C	LEU143
C	GLY144
C	ALA145
C	CYS149
C	THR150
C	GLY152
C	GLY153
C	ASN154
C	SER156
C	THR157
C	ALA159
C	GLY160
C	GLU210
C	GLY211
C	GLY214
C	ILE216
C	GLU433
C	ASN470
C	HOH760
C	HOH785
C	HOH1195
C	HOH1230
C	PRO79
C	GLN80
C	GLY81
C	GLY82

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 C 480

Chain	Residue
C	THR60
C	ARG108
C	GLU178

site_id	BC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE PO4 C 486

Chain	Residue
C	LYS352
C	ASP354
C	HIS434
C	LYS440

site_id	BC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 C 492

Chain	Residue
C	SER341
C	GLN344
C	LYS352
C	PHE385
C	ASN396

site_id	BC4
Number of Residues	32
Details	BINDING SITE FOR RESIDUE FAD D 476

Chain	Residue
D	PRO79
D	GLN80
D	GLY81
D	GLY82
D	ASN83
D	THR84
D	GLY85
D	GLY89
D	GLN90
D	LEU101
D	ALA121
D	LEU143
D	GLY144
D	ALA145
D	CYS149
D	THR150
D	GLY152
D	GLY153
D	ASN154
D	SER156
D	THR157
D	ALA159
D	GLY160
D	GLU210
D	GLY211
D	GLY214
D	ILE216
D	GLU433
D	ASN470
D	HOH521
D	HOH629
D	HOH692

site_id	BC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 D 481

Chain	Residue
D	THR60
D	ARG108
D	GLU178
D	HOH696
D	HOH1294
D	HOH1300

site_id	BC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 D 487

Chain	Residue
D	LYS352
D	HIS353
D	ASP354
D	HIS434
D	LYS440
D	HOH878

site_id	BC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 D 493

Chain	Residue
D	SER341
D	GLN344
D	LYS352
D	PHE385
D	HIS394
D	ASN396

site_id	BC8
Number of Residues	34
Details	BINDING SITE FOR RESIDUE FAD E 476

Chain	Residue
E	PRO79
E	GLN80
E	GLY81
E	GLY82
E	ASN83
E	THR84
E	GLY85
E	LEU86
E	GLY89
E	GLN90
E	LEU101
E	ALA121
E	LEU143
E	GLY144
E	ALA145
E	CYS149
E	THR150
E	GLY152
E	GLY153
E	ASN154
E	SER156
E	THR157
E	ALA159
E	GLY160
E	GLU210
E	GLY211
E	GLY214
E	ILE215
E	ILE216
E	GLU433
E	ASN470
E	HOH562
E	HOH573
E	HOH601

site_id	BC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PO4 E 482

Chain	Residue
E	THR60
E	ARG108
E	GLU178

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE PO4 E 488

Chain	Residue
E	HIS353
E	ASP354
E	HIS434
E	LYS440

site_id	CC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 E 494

Chain	Residue
E	SER341
E	GLN344
E	LYS352
E	PHE385
E	HIS394
E	ASN396

site_id	CC3
Number of Residues	32
Details	BINDING SITE FOR RESIDUE FAD F 476

Chain	Residue
F	PRO79
F	GLN80
F	GLY81
F	GLY82
F	ASN83
F	THR84
F	GLY85
F	GLY89
F	GLN90
F	LEU101
F	ALA121
F	LEU143
F	GLY144
F	ALA145
F	CYS149
F	THR150
F	GLY153
F	ASN154
F	SER156
F	THR157
F	ALA159
F	GLY160
F	GLU210
F	GLY211
F	GLY214
F	ILE215
F	ILE216
F	GLU433
F	ASN470
F	HOH569
F	HOH775
F	HOH1413

site_id	CC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 F 483

Chain	Residue
F	THR60
F	ARG108
F	GLU178
F	HOH1017
F	HOH1270

site_id	CC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE PO4 F 489

Chain	Residue
F	LYS352
F	ASP354
F	HIS434
F	LYS440

site_id	CC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 F 495

Chain	Residue
F	SER341
F	GLN344
F	LYS352
F	PHE385
F	ASN396

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)