3PKP
Q83S Variant of S. Enterica RmlA with dATP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| A | 0009058 | biological_process | biosynthetic process |
| A | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| A | 0009243 | biological_process | O antigen biosynthetic process |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| A | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| B | 0009058 | biological_process | biosynthetic process |
| B | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| B | 0009243 | biological_process | O antigen biosynthetic process |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| B | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| C | 0009058 | biological_process | biosynthetic process |
| C | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| C | 0009243 | biological_process | O antigen biosynthetic process |
| C | 0016779 | molecular_function | nucleotidyltransferase activity |
| C | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| C | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000287 | molecular_function | magnesium ion binding |
| D | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| D | 0009058 | biological_process | biosynthetic process |
| D | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| D | 0009243 | biological_process | O antigen biosynthetic process |
| D | 0016779 | molecular_function | nucleotidyltransferase activity |
| D | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| D | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| D | 0046872 | molecular_function | metal ion binding |
| I | 0000287 | molecular_function | magnesium ion binding |
| I | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| I | 0009058 | biological_process | biosynthetic process |
| I | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| I | 0009243 | biological_process | O antigen biosynthetic process |
| I | 0016779 | molecular_function | nucleotidyltransferase activity |
| I | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| I | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0000287 | molecular_function | magnesium ion binding |
| J | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| J | 0009058 | biological_process | biosynthetic process |
| J | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| J | 0009243 | biological_process | O antigen biosynthetic process |
| J | 0016779 | molecular_function | nucleotidyltransferase activity |
| J | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| J | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0000287 | molecular_function | magnesium ion binding |
| K | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| K | 0009058 | biological_process | biosynthetic process |
| K | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| K | 0009243 | biological_process | O antigen biosynthetic process |
| K | 0016779 | molecular_function | nucleotidyltransferase activity |
| K | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| K | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| K | 0046872 | molecular_function | metal ion binding |
| L | 0000287 | molecular_function | magnesium ion binding |
| L | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| L | 0009058 | biological_process | biosynthetic process |
| L | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| L | 0009243 | biological_process | O antigen biosynthetic process |
| L | 0016779 | molecular_function | nucleotidyltransferase activity |
| L | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| L | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| L | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE DTP A 500 |
| Chain | Residue |
| A | LEU9 |
| A | GLN27 |
| A | SER83 |
| A | SER85 |
| A | PRO86 |
| A | GLY110 |
| A | ASP111 |
| A | MG501 |
| A | MG502 |
| A | ALA10 |
| A | GLY11 |
| A | GLY12 |
| A | SER13 |
| A | GLY14 |
| A | THR15 |
| A | ARG16 |
| A | LYS26 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 501 |
| Chain | Residue |
| A | ARG16 |
| A | ASP111 |
| A | ASP226 |
| A | DTP500 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 502 |
| Chain | Residue |
| A | DTP500 |
| site_id | AC4 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DTP B 500 |
| Chain | Residue |
| B | LEU9 |
| B | GLY11 |
| B | GLY12 |
| B | SER13 |
| B | GLY14 |
| B | THR15 |
| B | ARG16 |
| B | LYS26 |
| B | GLN27 |
| B | SER83 |
| B | SER85 |
| B | PRO86 |
| B | GLY110 |
| B | ASP111 |
| B | MG501 |
| B | MG502 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG B 501 |
| Chain | Residue |
| B | ARG16 |
| B | ASP111 |
| B | ASP226 |
| B | DTP500 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG B 502 |
| Chain | Residue |
| B | DTP500 |
| site_id | AC7 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE DTP C 500 |
| Chain | Residue |
| C | LEU9 |
| C | GLY11 |
| C | GLY12 |
| C | SER13 |
| C | GLY14 |
| C | THR15 |
| C | ARG16 |
| C | LYS26 |
| C | GLN27 |
| C | SER83 |
| C | SER85 |
| C | PRO86 |
| C | GLY110 |
| C | ASP111 |
| C | MG501 |
| C | MG502 |
| D | LYS278 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG C 501 |
| Chain | Residue |
| C | ARG16 |
| C | ASP111 |
| C | ASP226 |
| C | DTP500 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG C 502 |
| Chain | Residue |
| C | DTP500 |
| site_id | BC1 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DTP D 500 |
| Chain | Residue |
| D | LEU9 |
| D | GLY11 |
| D | GLY12 |
| D | SER13 |
| D | GLY14 |
| D | THR15 |
| D | ARG16 |
| D | LYS26 |
| D | GLN27 |
| D | SER83 |
| D | SER85 |
| D | PRO86 |
| D | GLY110 |
| D | ASP111 |
| D | MG501 |
| D | MG502 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG D 501 |
| Chain | Residue |
| D | ASP111 |
| D | ASP226 |
| D | DTP500 |
| site_id | BC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG D 502 |
| Chain | Residue |
| D | DTP500 |
| site_id | BC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE DTP I 500 |
| Chain | Residue |
| I | MG501 |
| I | MG502 |
| J | HOH313 |
| I | LEU9 |
| I | GLY11 |
| I | GLY12 |
| I | SER13 |
| I | GLY14 |
| I | THR15 |
| I | ARG16 |
| I | LYS26 |
| I | GLN27 |
| I | SER83 |
| I | SER85 |
| I | PRO86 |
| I | GLY110 |
| I | ASP111 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG I 501 |
| Chain | Residue |
| I | ASP111 |
| I | ASP226 |
| I | HOH313 |
| I | DTP500 |
| site_id | BC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG I 502 |
| Chain | Residue |
| I | DTP500 |
| site_id | BC7 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE DTP J 500 |
| Chain | Residue |
| J | LEU9 |
| J | ALA10 |
| J | GLY11 |
| J | GLY12 |
| J | SER13 |
| J | GLY14 |
| J | THR15 |
| J | ARG16 |
| J | LYS26 |
| J | GLN27 |
| J | SER83 |
| J | SER85 |
| J | PRO86 |
| J | GLY110 |
| J | ASP111 |
| J | HOH304 |
| J | MG501 |
| J | MG502 |
| site_id | BC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG J 501 |
| Chain | Residue |
| J | ASP111 |
| J | ASP226 |
| J | DTP500 |
| site_id | BC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG J 502 |
| Chain | Residue |
| J | DTP500 |
| site_id | CC1 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE DTP K 500 |
| Chain | Residue |
| K | GLY11 |
| K | GLY12 |
| K | SER13 |
| K | GLY14 |
| K | THR15 |
| K | ARG16 |
| K | LYS26 |
| K | GLN27 |
| K | SER83 |
| K | SER85 |
| K | PRO86 |
| K | GLY110 |
| K | ASP111 |
| K | MG501 |
| K | MG502 |
| site_id | CC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG K 501 |
| Chain | Residue |
| K | ARG16 |
| K | ASP111 |
| K | ASP226 |
| K | DTP500 |
| site_id | CC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG K 502 |
| Chain | Residue |
| K | DTP500 |
| site_id | CC4 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DTP L 500 |
| Chain | Residue |
| L | LEU9 |
| L | GLY11 |
| L | GLY12 |
| L | SER13 |
| L | GLY14 |
| L | THR15 |
| L | ARG16 |
| L | LYS26 |
| L | GLN27 |
| L | SER83 |
| L | SER85 |
| L | PRO86 |
| L | GLY110 |
| L | ASP111 |
| L | MG501 |
| L | MG502 |
| site_id | CC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG L 501 |
| Chain | Residue |
| L | ARG16 |
| L | ASP111 |
| L | ASP226 |
| L | DTP500 |
| site_id | CC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG L 502 |
| Chain | Residue |
| L | DTP500 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 16 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:P61887 |
| Chain | Residue | Details |
| A | ASP111 | |
| I | ASP226 | |
| J | ASP111 | |
| J | ASP226 | |
| K | ASP111 | |
| K | ASP226 | |
| L | ASP111 | |
| L | ASP226 | |
| A | ASP226 | |
| B | ASP111 | |
| B | ASP226 | |
| C | ASP111 | |
| C | ASP226 | |
| D | ASP111 | |
| D | ASP226 | |
| I | ASP111 |
