Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3PKB

M. tuberculosis MetAP with bengamide analog Y16, in Mn form

Functional Information from GO Data
ChainGOidnamespacecontents
A0004177molecular_functionaminopeptidase activity
A0004239molecular_functioninitiator methionyl aminopeptidase activity
A0005506molecular_functioniron ion binding
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0008235molecular_functionmetalloexopeptidase activity
A0016485biological_processprotein processing
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
A0046914molecular_functiontransition metal ion binding
A0050897molecular_functioncobalt ion binding
A0070006molecular_functionmetalloaminopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE Y16 A 286
ChainResidue
ATYR97
AHIS212
AGLU238
AGLU269
AMN287
AMN288
AHOH312
AHOH417
ACYS105
AHIS114
AASP131
AASP142
APHE202
ATHR203
AHIS205
APHE211

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 287
ChainResidue
AASP142
AHIS205
AGLU238
AGLU269
AY16286
AMN288

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 288
ChainResidue
AASP131
AASP142
AGLU269
AY16286
AMN287

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 289
ChainResidue
AASN20
AARG200
AHOH354
AHOH405
AHOH452
AHOH466

Functional Information from PROSITE/UniProt
site_idPS00680
Number of Residues19
DetailsMAP_1 Methionine aminopeptidase subfamily 1 signature. FtGHGIGttfHnglvVl.HY
ChainResidueDetails
APHE202-TYR220

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues7
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01974, ECO:0000269|PubMed:15882055, ECO:0000269|PubMed:20038112, ECO:0000269|PubMed:21465667
ChainResidueDetails
AHIS114
AASP131
AASP142
AHIS205
AHIS212
AGLU238
AGLU269

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon