3PFL
CRYSTAL STRUCTURE OF PFL FROM E.COLI IN COMPLEX WITH SUBSTRATE ANALOGUE OXAMATE
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005515 | molecular_function | protein binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0006006 | biological_process | glucose metabolic process |
A | 0008861 | molecular_function | formate C-acetyltransferase activity |
A | 0016020 | cellular_component | membrane |
A | 0016740 | molecular_function | transferase activity |
A | 0016746 | molecular_function | acyltransferase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0005515 | molecular_function | protein binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0006006 | biological_process | glucose metabolic process |
B | 0008861 | molecular_function | formate C-acetyltransferase activity |
B | 0016020 | cellular_component | membrane |
B | 0016740 | molecular_function | transferase activity |
B | 0016746 | molecular_function | acyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE OXM A 761 |
Chain | Residue |
A | ARG176 |
A | ALA272 |
A | TRP333 |
A | CYS418 |
A | PHE432 |
A | ARG435 |
A | LEU604 |
A | ILE606 |
A | HOH809 |
site_id | AC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE OXM B 762 |
Chain | Residue |
B | ARG176 |
B | ALA272 |
B | CYS418 |
B | PHE432 |
B | ARG435 |
B | LEU604 |
B | ILE606 |
B | HOH778 |
Functional Information from PROSITE/UniProt
site_id | PS00850 |
Number of Residues | 9 |
Details | GLY_RADICAL_1 Glycine radical domain signature. TiRVSGYAV |
Chain | Residue | Details |
A | THR729-VAL737 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: S-acetylcysteine intermediate => ECO:0000269|PubMed:1310545 |
Chain | Residue | Details |
A | CYS419 | |
B | CYS419 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Cysteine radical intermediate => ECO:0000269|PubMed:1310545 |
Chain | Residue | Details |
A | VAL420 | |
B | VAL420 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122 |
Chain | Residue | Details |
A | LEU63 | |
A | MET117 | |
A | ASP195 | |
A | LEU454 | |
B | LEU63 | |
B | MET117 | |
B | ASP195 | |
B | LEU454 |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | MOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122 |
Chain | Residue | Details |
A | ARG107 | |
A | ALA124 | |
A | GLY467 | |
A | LEU654 | |
B | ARG107 | |
B | ALA124 | |
B | GLY467 | |
B | LEU654 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842 |
Chain | Residue | Details |
A | TYR541 | |
A | LEU591 | |
B | TYR541 | |
B | LEU591 |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | MOD_RES: Glycine radical => ECO:0000269|PubMed:1310545 |
Chain | Residue | Details |
A | TYR735 | |
B | TYR735 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 4 |
Details | M-CSA 30 |
Chain | Residue | Details |
A | ALA334 | hydrogen bond donor, radical stabiliser |
A | CYS419 | covalently attached, hydrogen bond acceptor, hydrogen bond donor, hydrogen radical acceptor, hydrogen radical donor, leaving group (radical), radical combinant |
A | VAL420 | hydrogen bond acceptor, hydrogen bond donor, hydrogen radical acceptor, hydrogen radical donor, hydrogen radical relay |
A | TYR735 | hydrogen bond acceptor, hydrogen bond donor, hydrogen radical acceptor, hydrogen radical donor |
site_id | MCSA2 |
Number of Residues | 4 |
Details | M-CSA 30 |
Chain | Residue | Details |
B | ALA334 | hydrogen bond donor, radical stabiliser |
B | CYS419 | covalently attached, hydrogen bond acceptor, hydrogen bond donor, hydrogen radical acceptor, hydrogen radical donor, leaving group (radical), radical combinant |
B | VAL420 | hydrogen bond acceptor, hydrogen bond donor, hydrogen radical acceptor, hydrogen radical donor, hydrogen radical relay |
B | TYR735 | hydrogen bond acceptor, hydrogen bond donor, hydrogen radical acceptor, hydrogen radical donor |