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3P97

Dengue 3 NS5 Methyltransferase bound to the substrate S-Adenosyl methionine

Functional Information from GO Data
ChainGOidnamespacecontents
A0004482molecular_functionmRNA 5'-cap (guanine-N7-)-methyltransferase activity
A0004483molecular_functionmethyltransferase cap1 activity
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
C0004482molecular_functionmRNA 5'-cap (guanine-N7-)-methyltransferase activity
C0004483molecular_functionmethyltransferase cap1 activity
C0008168molecular_functionmethyltransferase activity
C0032259biological_processmethylation
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE SAM A 263
ChainResidue
ASER56
AHIS110
ALYS130
AASP131
AVAL132
APHE133
AASP146
AHOH279
AHOH283
AHOH308
AHOH349
AGLY58
AHOH359
AGLY81
ACYS82
AGLY83
AGLY86
ATRP87
ATHR104
ALYS105

site_idAC2
Number of Residues22
DetailsBINDING SITE FOR RESIDUE SAM C 263
ChainResidue
CSER56
CGLY58
CGLY81
CCYS82
CGLY83
CGLY86
CTRP87
CTHR104
CLYS105
CHIS110
CGLU111
CLYS130
CASP131
CVAL132
CPHE133
CASP146
CHOH270
CHOH294
CHOH301
CHOH343
CHOH453
CHOH635

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsMotif: {"description":"SUMO-interacting motif","evidences":[{"source":"UniProtKB","id":"P29990","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsActive site: {"description":"For 2'-O-MTase activity","evidences":[{"source":"UniProtKB","id":"Q6YMS4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues14
DetailsSite: {"description":"mRNA cap binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsSite: {"description":"mRNA cap binding; via carbonyl oxygen","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues6
DetailsSite: {"description":"Essential for 2'-O-methyltransferase activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsSite: {"description":"Essential for 2'-O-methyltransferase and N-7 methyltransferase activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P03314","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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