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3P41

Crystal structure of polyprenyl synthetase from pseudomonas fluorescens pf-5 complexed with magnesium and isoprenyl pyrophosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0004337molecular_functiongeranyltranstransferase activity
A0004659molecular_functionprenyltransferase activity
A0005737cellular_componentcytoplasm
A0008299biological_processisoprenoid biosynthetic process
A0016740molecular_functiontransferase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 296
ChainResidue
AASP223
APOP301
AHOH338
AHOH360
AHOH375
AHOH380

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 297
ChainResidue
ADMA300
AHOH304
AHOH383
AHOH384
AASP83
AASP89
AMG298

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 298
ChainResidue
AASP83
AASP89
AMG297
ADMA300
AHOH381
AHOH382

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE DMA A 299
ChainResidue
ALYS44
AARG45
AVAL46
AARG47
AHIS76
AARG95
AILE185
APHE218
AILE290
AHOH305
AHOH306
AHOH313
AHOH387
AHOH389

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE DMA A 300
ChainResidue
ASER79
AASP83
AASP89
AARG94
AGLN157
ALYS180
AMG297
AMG298
APOP301
AHOH311
AHOH381
AHOH382
AHOH385

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE POP A 301
ChainResidue
AASP160
AMSE176
AHIS177
ALYS180
AMG296
ADMA300
AHOH311
AHOH375

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 302
ChainResidue
AASP90
AASP91
AASP92
ALEU93
AGLY197
AARG198
AHOH371

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 303
ChainResidue
AALA23
AARG36
ALYS61
AHOH431

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. IGlaFQVqDDIlD
ChainResidueDetails
AILE214-ASP226

site_idPS00723
Number of Residues17
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVhDDlpamDdddlRRG
ChainResidueDetails
ALEU80-GLY96

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PDB entries from 2024-10-30

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