3P2L
Crystal Structure of ATP-dependent Clp protease subunit P from Francisella tularensis
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004176 | molecular_function | ATP-dependent peptidase activity |
A | 0004252 | molecular_function | serine-type endopeptidase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006508 | biological_process | proteolysis |
A | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
A | 0008236 | molecular_function | serine-type peptidase activity |
A | 0009368 | cellular_component | endopeptidase Clp complex |
A | 0051117 | molecular_function | ATPase binding |
B | 0004176 | molecular_function | ATP-dependent peptidase activity |
B | 0004252 | molecular_function | serine-type endopeptidase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006508 | biological_process | proteolysis |
B | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
B | 0008236 | molecular_function | serine-type peptidase activity |
B | 0009368 | cellular_component | endopeptidase Clp complex |
B | 0051117 | molecular_function | ATPase binding |
C | 0004176 | molecular_function | ATP-dependent peptidase activity |
C | 0004252 | molecular_function | serine-type endopeptidase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0006508 | biological_process | proteolysis |
C | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
C | 0008236 | molecular_function | serine-type peptidase activity |
C | 0009368 | cellular_component | endopeptidase Clp complex |
C | 0051117 | molecular_function | ATPase binding |
D | 0004176 | molecular_function | ATP-dependent peptidase activity |
D | 0004252 | molecular_function | serine-type endopeptidase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0006508 | biological_process | proteolysis |
D | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
D | 0008236 | molecular_function | serine-type peptidase activity |
D | 0009368 | cellular_component | endopeptidase Clp complex |
D | 0051117 | molecular_function | ATPase binding |
E | 0004176 | molecular_function | ATP-dependent peptidase activity |
E | 0004252 | molecular_function | serine-type endopeptidase activity |
E | 0005737 | cellular_component | cytoplasm |
E | 0006508 | biological_process | proteolysis |
E | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
E | 0008236 | molecular_function | serine-type peptidase activity |
E | 0009368 | cellular_component | endopeptidase Clp complex |
E | 0051117 | molecular_function | ATPase binding |
F | 0004176 | molecular_function | ATP-dependent peptidase activity |
F | 0004252 | molecular_function | serine-type endopeptidase activity |
F | 0005737 | cellular_component | cytoplasm |
F | 0006508 | biological_process | proteolysis |
F | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
F | 0008236 | molecular_function | serine-type peptidase activity |
F | 0009368 | cellular_component | endopeptidase Clp complex |
F | 0051117 | molecular_function | ATPase binding |
G | 0004176 | molecular_function | ATP-dependent peptidase activity |
G | 0004252 | molecular_function | serine-type endopeptidase activity |
G | 0005737 | cellular_component | cytoplasm |
G | 0006508 | biological_process | proteolysis |
G | 0006515 | biological_process | protein quality control for misfolded or incompletely synthesized proteins |
G | 0008236 | molecular_function | serine-type peptidase activity |
G | 0009368 | cellular_component | endopeptidase Clp complex |
G | 0051117 | molecular_function | ATPase binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 202 |
Chain | Residue |
A | MSE84 |
A | ILE87 |
A | PRO89 |
A | PO4212 |
A | HOH259 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG A 203 |
Chain | Residue |
A | TYR66 |
A | ARG196 |
A | HOH293 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 204 |
Chain | Residue |
A | MSE102 |
A | SER104 |
A | ILE125 |
A | HIS126 |
A | HOH298 |
A | SER101 |
site_id | AC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG A 205 |
Chain | Residue |
A | PRO70 |
A | SER101 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 206 |
Chain | Residue |
A | ASN176 |
A | MSE178 |
A | GLU182 |
A | HOH330 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG A 207 |
Chain | Residue |
A | TYR81 |
D | SER120 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO A 208 |
Chain | Residue |
A | LYS184 |
A | HIS191 |
A | VAL192 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 209 |
Chain | Residue |
A | THR161 |
A | GLN163 |
A | ALA185 |
A | GOL211 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO A 210 |
Chain | Residue |
A | HOH225 |
A | HOH229 |
A | HOH309 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 211 |
Chain | Residue |
A | LYS112 |
A | ARG115 |
A | HIS160 |
A | THR161 |
A | GOL209 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PO4 A 212 |
Chain | Residue |
A | GLN85 |
A | ILE87 |
A | LYS88 |
A | ASP90 |
A | MG202 |
A | HOH248 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 202 |
Chain | Residue |
B | MSE84 |
B | ILE87 |
B | PRO89 |
B | PO4204 |
B | HOH220 |
site_id | BC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PO4 B 203 |
Chain | Residue |
B | LYS184 |
B | HIS191 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PO4 B 204 |
Chain | Residue |
B | GLN85 |
B | ILE87 |
B | LYS88 |
B | ASP90 |
B | MG202 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG B 205 |
Chain | Residue |
B | TYR66 |
B | ARG196 |
B | HOH295 |
B | HOH296 |
site_id | BC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG B 206 |
Chain | Residue |
B | VAL74 |
B | SER101 |
B | HIS126 |
B | GLN127 |
B | PRO128 |
B | LEU129 |
B | PEG207 |
site_id | BC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PEG B 207 |
Chain | Residue |
B | PRO70 |
B | GLY71 |
B | GLY72 |
B | SER101 |
B | LEU129 |
B | PEG206 |
site_id | BC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE GOL B 208 |
Chain | Residue |
B | GLU182 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 209 |
Chain | Residue |
B | PHE34 |
B | ASN36 |
C | ASN45 |
G | LEU6 |
site_id | CC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG B 211 |
Chain | Residue |
A | LYS61 |
B | THR161 |
B | GLY162 |
B | ALA185 |
B | GLY187 |
site_id | CC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG C 202 |
Chain | Residue |
C | MSE84 |
C | ILE87 |
C | PRO89 |
C | PO4209 |
C | HOH232 |
C | HOH233 |
site_id | CC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG C 203 |
Chain | Residue |
C | TYR66 |
C | ARG196 |
site_id | CC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG C 204 |
Chain | Residue |
C | SER101 |
C | SER104 |
C | ILE125 |
C | HIS126 |
C | GLN127 |
C | PRO128 |
C | HOH219 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL C 205 |
Chain | Residue |
C | HOH297 |
C | PRO70 |
C | SER101 |
site_id | CC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG C 206 |
Chain | Residue |
C | LYS184 |
C | HIS191 |
C | VAL192 |
site_id | CC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO C 207 |
Chain | Residue |
C | LYS112 |
C | HIS160 |
C | THR161 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 208 |
Chain | Residue |
C | PHE34 |
C | ASN36 |
C | HOH213 |
C | HOH222 |
site_id | DC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PO4 C 209 |
Chain | Residue |
B | SER195 |
C | GLN85 |
C | ILE87 |
C | LYS88 |
C | MG202 |
C | HOH233 |
site_id | DC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG D 202 |
Chain | Residue |
D | MSE84 |
D | ILE87 |
D | PRO89 |
D | PO4209 |
D | HOH210 |
site_id | DC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG D 203 |
Chain | Residue |
D | TYR66 |
D | ARG196 |
site_id | DC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG D 204 |
Chain | Residue |
D | PRO70 |
D | GLY71 |
D | GLY72 |
D | SER101 |
site_id | DC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL D 205 |
Chain | Residue |
D | SER101 |
D | MSE102 |
D | HIS126 |
site_id | DC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG D 206 |
Chain | Residue |
D | ASN176 |
D | PHE177 |
D | MSE178 |
site_id | DC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL D 207 |
Chain | Residue |
D | LYS184 |
D | HIS191 |
D | VAL192 |
site_id | DC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG D 208 |
Chain | Residue |
D | THR161 |
D | ALA185 |
site_id | DC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PO4 D 209 |
Chain | Residue |
D | GLN85 |
D | ILE87 |
D | LYS88 |
D | ASP90 |
D | MG202 |
D | HOH346 |
site_id | EC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG E 202 |
Chain | Residue |
E | MSE84 |
E | ILE87 |
E | PRO89 |
E | PO4210 |
E | HOH223 |
site_id | EC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG E 203 |
Chain | Residue |
E | TYR64 |
E | TYR66 |
E | ARG196 |
site_id | EC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG E 204 |
Chain | Residue |
E | SER101 |
E | SER104 |
E | ILE125 |
E | HIS126 |
E | PRO128 |
E | LEU153 |
E | HOH311 |
site_id | EC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG E 205 |
Chain | Residue |
E | GLU38 |
E | PRO70 |
E | SER101 |
E | LEU129 |
site_id | EC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG E 206 |
Chain | Residue |
E | ASN176 |
E | PHE177 |
E | HOH232 |
site_id | EC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL E 207 |
Chain | Residue |
E | THR161 |
E | GLY162 |
E | ALA185 |
E | GLY187 |
E | HOH319 |
site_id | EC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL E 208 |
Chain | Residue |
E | ASN36 |
E | HOH214 |
E | HOH220 |
site_id | EC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE GOL E 209 |
Chain | Residue |
E | HIS160 |
site_id | EC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 E 210 |
Chain | Residue |
C | GLU197 |
E | GLN85 |
E | ILE87 |
E | ASP90 |
E | MG202 |
E | HOH211 |
E | HOH283 |
site_id | FC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG F 202 |
Chain | Residue |
F | MSE84 |
F | ILE87 |
F | PRO89 |
F | PO4208 |
site_id | FC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG F 203 |
Chain | Residue |
F | GLY72 |
F | SER101 |
F | HOH224 |
F | HOH248 |
site_id | FC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG F 204 |
Chain | Residue |
F | SER101 |
F | SER104 |
F | ILE125 |
F | HIS126 |
F | PRO128 |
F | LEU157 |
F | HOH224 |
site_id | FC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL F 205 |
Chain | Residue |
F | ASN176 |
F | PHE177 |
F | MSE178 |
F | GLU182 |
site_id | FC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO F 206 |
Chain | Residue |
F | THR161 |
F | ALA185 |
site_id | FC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG F 207 |
Chain | Residue |
F | TYR66 |
F | ARG196 |
site_id | FC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PO4 F 208 |
Chain | Residue |
E | GLU197 |
F | GLN85 |
F | ILE87 |
F | LYS88 |
F | ASP90 |
F | MG202 |
site_id | FC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG G 202 |
Chain | Residue |
G | MSE84 |
G | ILE87 |
G | PRO89 |
G | PO4211 |
G | HOH233 |
site_id | FC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG G 203 |
Chain | Residue |
G | ILE32 |
G | TYR66 |
G | ARG196 |
site_id | GC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG G 204 |
Chain | Residue |
G | SER101 |
G | MSE102 |
G | ILE125 |
G | HIS126 |
G | GLN127 |
G | PRO128 |
G | LEU157 |
site_id | GC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PEG G 205 |
Chain | Residue |
G | PRO70 |
G | GLY71 |
G | GLY72 |
G | SER101 |
G | LEU129 |
G | HOH262 |
site_id | GC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PEG G 206 |
Chain | Residue |
G | ASN176 |
G | PHE177 |
G | MSE178 |
site_id | GC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PO4 G 207 |
Chain | Residue |
G | LYS184 |
G | HIS191 |
G | VAL192 |
site_id | GC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE EDO G 208 |
Chain | Residue |
G | LYS112 |
site_id | GC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG G 209 |
Chain | Residue |
E | ASP181 |
G | THR161 |
G | GLN163 |
G | ALA185 |
site_id | GC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL G 210 |
Chain | Residue |
B | ASN45 |
G | HOH223 |
site_id | GC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 G 211 |
Chain | Residue |
A | HOH262 |
G | GLN85 |
G | ILE87 |
G | LYS88 |
G | PRO89 |
G | ASP90 |
G | MG202 |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 7 |
Details | ACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_00444 |
Chain | Residue | Details |
A | SER101 | |
B | SER101 | |
C | SER101 | |
D | SER101 | |
E | SER101 | |
F | SER101 | |
G | SER101 |
site_id | SWS_FT_FI2 |
Number of Residues | 7 |
Details | ACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00444 |
Chain | Residue | Details |
A | HIS126 | |
B | HIS126 | |
C | HIS126 | |
D | HIS126 | |
E | HIS126 | |
F | HIS126 | |
G | HIS126 |