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3P12

Crystal Structure of D-ribose Pyranase Sa240

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005996biological_processmonosaccharide metabolic process
A0016853molecular_functionisomerase activity
A0016866molecular_functionintramolecular transferase activity
A0016872molecular_functionintramolecular lyase activity
A0019303biological_processD-ribose catabolic process
A0048029molecular_functionmonosaccharide binding
A0062193molecular_functionD-ribose pyranase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005996biological_processmonosaccharide metabolic process
B0016853molecular_functionisomerase activity
B0016866molecular_functionintramolecular transferase activity
B0016872molecular_functionintramolecular lyase activity
B0019303biological_processD-ribose catabolic process
B0048029molecular_functionmonosaccharide binding
B0062193molecular_functionD-ribose pyranase activity
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005996biological_processmonosaccharide metabolic process
C0016853molecular_functionisomerase activity
C0016866molecular_functionintramolecular transferase activity
C0016872molecular_functionintramolecular lyase activity
C0019303biological_processD-ribose catabolic process
C0048029molecular_functionmonosaccharide binding
C0062193molecular_functionD-ribose pyranase activity
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005996biological_processmonosaccharide metabolic process
D0016853molecular_functionisomerase activity
D0016866molecular_functionintramolecular transferase activity
D0016872molecular_functionintramolecular lyase activity
D0019303biological_processD-ribose catabolic process
D0048029molecular_functionmonosaccharide binding
D0062193molecular_functionD-ribose pyranase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 145
ChainResidue
AASP30
AMET33
ATYR125
AASN127
AHOH180

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 145
ChainResidue
BHOH207
BASP30
BTYR125
BASN127
BHOH170

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 145
ChainResidue
CASP30
CHIS101
CPRO124
CTYR125
CASN127
CHOH164

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL D 145
ChainResidue
DASP30
DMET33
DPRO124
DTYR125
DASN127
DHOH163

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"HAMAP-Rule","id":"MF_01661","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01661","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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