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3OYB

Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI MK2048

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0015074biological_processDNA integration
Functional Information from PDB Data
site_id1
Number of Residues
Details
ChainResidue

site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 393
ChainResidue
AHIS62
AHIS66
ACYS96
ACYS99

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 394
ChainResidue
AHIS338
ALYS339
AHIS357

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 801
ChainResidue
ASER164
AHOH442
ASER162
ATHR163

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 802
ChainResidue
APRO135
ASER136
AGLN137
ALYS241

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 803
ChainResidue
ALEU292
AGLN296
BTYR263
BGLY271
BASP273

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 805
ChainResidue
AGLN60
ALEU79
ATYR80
APRO277
APHE278

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE NH4 A 395
ChainResidue
AASP116

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 396
ChainResidue
AASP128
AASP185
AZZX398
AHOH399
AHOH541

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 397
ChainResidue
AASP128
AGLU221
AZZX398
DHOH26

site_idBC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ZZX A 398
ChainResidue
AASP128
AASP185
ATYR212
APRO214
AGLN215
AGLU221
AMG396
AMG397
AHOH399
AHOH541
CDG4
DDC16
DDA17

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 393
ChainResidue
BARG222
BSER258
BPRO259
BVAL260

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 394
ChainResidue
BASP128
BASP185
BHOH395
BHOH396
BHOH438
CDA19

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP123
AASP185
BASP123
BASP185

218853

PDB entries from 2024-04-24

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