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3ORD

Structural Evidence for Stabilization of Inhibitor Binding by a Protein Cavity in the Dehaloperoxidase-Hemoglobin from Amphitrite ornata

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0015671biological_processoxygen transport
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004601molecular_functionperoxidase activity
B0005344molecular_functionoxygen carrier activity
B0015671biological_processoxygen transport
B0019825molecular_functionoxygen binding
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEM A 139
ChainResidue
APHE24
AMET86
AGLN88
AHIS89
ALEU92
AASN96
APHE97
ALEU100
ALEU127
AXE140
AHOH254
AGLU31
ATYR34
APHE35
AHIS55
ALYS58
AVAL59
AMET63
ALEU83

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE XE A 140
ChainResidue
APHE21
AHEM139
AHOH254

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE XE A 141
ChainResidue
ALEU62
AVAL66
AASP79
ATHR82

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 142
ChainResidue
AGLY1
APHE2
ALYS3
AHOH225
BARG32
BGLY40
BLYS41
BHOH220

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 143
ChainResidue
AARG32
AGLY40
AHOH221
BGLY1
BPHE2
BLYS3

site_idAC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM B 139
ChainResidue
BPHE24
BGLU31
BTYR34
BPHE35
BLYS36
BHIS55
BLYS58
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97
BLEU127
BHOH223
BHOH248
BHOH256
BHOH257

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE XE B 140
ChainResidue
BPHE21
BHOH256

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE XE B 141
ChainResidue
BLEU62
BASP79
BTHR82

224201

PDB entries from 2024-08-28

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