3OD8
Human PARP-1 zinc finger 1 (Zn1) bound to DNA
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0008270 | molecular_function | zinc ion binding |
B | 0003677 | molecular_function | DNA binding |
B | 0008270 | molecular_function | zinc ion binding |
C | 0003677 | molecular_function | DNA binding |
C | 0008270 | molecular_function | zinc ion binding |
D | 0003677 | molecular_function | DNA binding |
D | 0008270 | molecular_function | zinc ion binding |
E | 0003677 | molecular_function | DNA binding |
E | 0008270 | molecular_function | zinc ion binding |
F | 0003677 | molecular_function | DNA binding |
F | 0008270 | molecular_function | zinc ion binding |
G | 0003677 | molecular_function | DNA binding |
G | 0008270 | molecular_function | zinc ion binding |
H | 0003677 | molecular_function | DNA binding |
H | 0008270 | molecular_function | zinc ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 200 |
Chain | Residue |
A | CYS21 |
A | CYS24 |
A | HIS53 |
A | CYS56 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 200 |
Chain | Residue |
B | CYS21 |
B | CYS24 |
B | HIS53 |
B | CYS56 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN C 200 |
Chain | Residue |
C | CYS24 |
C | HIS53 |
C | CYS56 |
C | CYS21 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN D 200 |
Chain | Residue |
D | CYS21 |
D | CYS24 |
D | HIS53 |
D | CYS56 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN E 200 |
Chain | Residue |
E | CYS21 |
E | CYS24 |
E | HIS53 |
E | CYS56 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN F 200 |
Chain | Residue |
F | CYS21 |
F | CYS24 |
F | HIS53 |
F | CYS56 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN G 200 |
Chain | Residue |
G | CYS21 |
G | CYS24 |
G | HIS53 |
G | CYS56 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN H 200 |
Chain | Residue |
H | CYS21 |
H | CYS24 |
H | HIS53 |
H | CYS56 |
Functional Information from PROSITE/UniProt
site_id | PS00347 |
Number of Residues | 36 |
Details | ZF_PARP_1 Zinc finger poly(ADP-ribose) polymerase (PARP)-type signature. CKkCsesIpKdslRmaimvqspmfdgkvph..WYHfsC |
Chain | Residue | Details |
A | CYS21-CYS56 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 32 |
Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00264","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"21233213","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22582261","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22683995","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3OD8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ODA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4AV1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4DQY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4OPX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4OQA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4OQB","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"DEC-2008","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Zebisch A.","Lilla S.","von Kriegsheim A.","Lempens A.","Kolch W."]}},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |