3OBI
Crystal structure of a formyltetrahydrofolate deformylase (NP_949368) from RHODOPSEUDOMONAS PALUSTRIS CGA009 at 1.95 A resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006164 | biological_process | purine nucleotide biosynthetic process |
A | 0006189 | biological_process | 'de novo' IMP biosynthetic process |
A | 0006730 | biological_process | one-carbon metabolic process |
A | 0008864 | molecular_function | formyltetrahydrofolate deformylase activity |
A | 0009058 | biological_process | biosynthetic process |
A | 0016787 | molecular_function | hydrolase activity |
B | 0006164 | biological_process | purine nucleotide biosynthetic process |
B | 0006189 | biological_process | 'de novo' IMP biosynthetic process |
B | 0006730 | biological_process | one-carbon metabolic process |
B | 0008864 | molecular_function | formyltetrahydrofolate deformylase activity |
B | 0009058 | biological_process | biosynthetic process |
B | 0016787 | molecular_function | hydrolase activity |
C | 0006164 | biological_process | purine nucleotide biosynthetic process |
C | 0006189 | biological_process | 'de novo' IMP biosynthetic process |
C | 0006730 | biological_process | one-carbon metabolic process |
C | 0008864 | molecular_function | formyltetrahydrofolate deformylase activity |
C | 0009058 | biological_process | biosynthetic process |
C | 0016787 | molecular_function | hydrolase activity |
D | 0006164 | biological_process | purine nucleotide biosynthetic process |
D | 0006189 | biological_process | 'de novo' IMP biosynthetic process |
D | 0006730 | biological_process | one-carbon metabolic process |
D | 0008864 | molecular_function | formyltetrahydrofolate deformylase activity |
D | 0009058 | biological_process | biosynthetic process |
D | 0016787 | molecular_function | hydrolase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 300 |
Chain | Residue |
A | TYR107 |
A | ARG110 |
A | ASP134 |
A | HOH759 |
B | GLY132 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 305 |
Chain | Residue |
A | HOH1209 |
B | ASP113 |
A | ARG253 |
A | ASP257 |
A | ARG260 |
A | HOH1077 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 308 |
Chain | Residue |
A | ARG89 |
A | HIS270 |
A | ASP273 |
A | ARG274 |
A | VAL275 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 309 |
Chain | Residue |
A | THR87 |
A | ARG88 |
A | ARG89 |
A | HIS115 |
A | LEU271 |
A | HOH618 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 310 |
Chain | Residue |
A | SER11 |
A | HIS46 |
A | LEU277 |
A | ASN278 |
A | GLY279 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 311 |
Chain | Residue |
A | PRO144 |
A | GLN153 |
A | HOH702 |
A | HOH1328 |
D | HIS142 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 320 |
Chain | Residue |
A | ARG127 |
A | GLU128 |
A | HOH1270 |
D | ASN146 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO A 327 |
Chain | Residue |
A | ALA249 |
A | HOH906 |
A | HOH1277 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 301 |
Chain | Residue |
B | PHE143 |
B | HOH403 |
B | HOH1075 |
B | HOH1094 |
C | ASP137 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO B 304 |
Chain | Residue |
B | ASP99 |
B | THR129 |
B | PHE130 |
B | SER131 |
B | HOH1137 |
B | HOH1174 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO B 307 |
Chain | Residue |
B | HIS268 |
B | TYR269 |
B | ASP287 |
B | HOH1033 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 312 |
Chain | Residue |
B | HIS194 |
B | SER196 |
B | THR221 |
D | LEU198 |
D | PRO199 |
site_id | BC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO B 313 |
Chain | Residue |
B | ARG66 |
B | TRP80 |
B | HIS81 |
B | MSE82 |
B | HOH932 |
B | HOH1120 |
B | HOH1241 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 319 |
Chain | Residue |
B | ASP137 |
B | HOH548 |
B | HOH658 |
B | HOH1103 |
C | PHE143 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO B 322 |
Chain | Residue |
B | ASP238 |
B | ARG261 |
B | ARG265 |
B | HOH797 |
site_id | BC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO B 326 |
Chain | Residue |
B | HIS208 |
B | ASP212 |
D | GLU43 |
site_id | BC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 328 |
Chain | Residue |
B | ARG89 |
B | HIS270 |
B | ASP273 |
B | ARG274 |
B | VAL275 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO C 302 |
Chain | Residue |
C | ARG66 |
C | TRP80 |
C | HIS81 |
C | MSE82 |
C | HOH736 |
C | HOH1216 |
site_id | CC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO C 306 |
Chain | Residue |
A | LEU198 |
A | PRO199 |
C | HIS194 |
C | SER196 |
C | THR221 |
C | HOH1045 |
site_id | CC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO C 314 |
Chain | Residue |
C | LEU106 |
C | ARG110 |
C | ASP134 |
D | EDO318 |
site_id | CC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO C 316 |
Chain | Residue |
C | THR9 |
C | ARG89 |
C | HIS270 |
C | ASP273 |
C | ARG274 |
C | VAL275 |
site_id | CC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO C 317 |
Chain | Residue |
C | ASP113 |
C | LEU114 |
C | ARG265 |
C | HOH1061 |
site_id | CC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO C 321 |
Chain | Residue |
A | PRO248 |
A | HOH585 |
C | GLU43 |
C | HOH696 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO C 323 |
Chain | Residue |
C | ASN29 |
C | SER64 |
C | GLY68 |
site_id | CC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO C 324 |
Chain | Residue |
C | ARG89 |
C | ASP167 |
C | HIS270 |
C | HOH1178 |
site_id | CC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO C 325 |
Chain | Residue |
C | ILE177 |
C | LEU178 |
C | ASP230 |
C | HOH526 |
site_id | CC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO D 303 |
Chain | Residue |
A | HIS142 |
D | PRO144 |
site_id | DC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO D 315 |
Chain | Residue |
D | ARG89 |
D | HIS270 |
D | ASP273 |
D | ARG274 |
D | VAL275 |
site_id | DC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO D 318 |
Chain | Residue |
C | ARG110 |
C | GLY132 |
C | EDO314 |
D | TYR107 |
D | ARG110 |
D | ASP134 |
D | HOH555 |