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3O9Z

Crystal structure of the WlbA (WbpB) dehydrogenase from Thermus thermophilus in complex with NAD and alpha-ketoglutarate at 1.45 angstrom resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
B0000166molecular_functionnucleotide binding
C0000166molecular_functionnucleotide binding
D0000166molecular_functionnucleotide binding
Functional Information from PDB Data
site_idAC1
Number of Residues36
DetailsBINDING SITE FOR RESIDUE NAD A 311
ChainResidue
AGLY8
ASER78
APRO79
AASN80
ALEU82
AHIS83
AGLN86
AGLU100
ALYS101
AGLN129
ATRP168
AALA10
ALYS169
AASN181
AHIS185
AHIS264
AAKG312
AHOH323
AHOH325
AHOH327
AHOH418
AHOH585
AGLY11
AHOH1050
AHOH1081
BASN37
BHOH319
DGLU55
DHOH320
DHOH345
ATYR12
AILE13
ALEU32
AASP33
APRO34
AALA77

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AKG A 312
ChainResidue
ALYS101
ATYR156
ATHR158
AARG160
AILE182
AHIS185
AARG245
APHE260
ANAD311
AHOH332
AHOH341

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 313
ChainResidue
APHE51
ATHR52
AGLU53
BLYS166

site_idAC4
Number of Residues36
DetailsBINDING SITE FOR RESIDUE NAD B 311
ChainResidue
AASN37
AHOH382
BGLY8
BALA10
BGLY11
BTYR12
BILE13
BLEU32
BASP33
BPRO34
BALA35
BALA77
BSER78
BPRO79
BASN80
BLEU82
BHIS83
BGLN86
BGLU100
BLYS101
BGLN129
BTRP168
BLYS169
BASN181
BHIS185
BHIS264
BAKG312
BHOH316
BHOH324
BHOH325
BHOH366
BHOH438
BHOH1051
CGLU55
CHOH322
CHOH340

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AKG B 312
ChainResidue
BLYS101
BTYR156
BTHR158
BARG160
BHIS185
BARG245
BPHE260
BNAD311
BHOH346
BHOH352
BHOH1086

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 313
ChainResidue
BGLY159
BARG160
BARG242
BHOH440
BHOH1217
BTHR158

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 314
ChainResidue
ALYS166
AHOH334
AHOH365
BTHR52
BHOH1093
BHOH1148
CALA173

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 315
ChainResidue
ALYS166
BPHE51
BTHR52
BGLU53

site_idAC9
Number of Residues36
DetailsBINDING SITE FOR RESIDUE NAD C 311
ChainResidue
BGLU55
BHOH327
BHOH400
CGLY8
CALA10
CGLY11
CTYR12
CILE13
CLEU32
CASP33
CPRO34
CALA77
CSER78
CPRO79
CASN80
CLEU82
CHIS83
CGLN86
CGLU100
CLYS101
CGLN129
CTRP168
CLYS169
CASN181
CHIS185
CHIS264
CAKG312
CHOH327
CHOH350
CHOH398
CHOH634
CHOH687
CHOH809
CHOH1088
DASN37
DHOH358

site_idBC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE AKG C 312
ChainResidue
CLYS101
CTYR156
CTHR158
CARG160
CASN181
CILE182
CHIS185
CARG245
CPHE260
CNAD311
CHOH316
CHOH393
CHOH703

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO C 313
ChainResidue
BHIS81
CTHR52
CHOH698
DLYS166

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL C 314
ChainResidue
CPHE51
CTHR52
CGLU53
DLYS166

site_idBC4
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NAD D 311
ChainResidue
AGLU55
AHOH483
CASN37
DGLY8
DALA10
DGLY11
DTYR12
DILE13
DLEU32
DASP33
DPRO34
DALA35
DALA77
DSER78
DPRO79
DASN80
DLEU82
DHIS83
DGLN86
DGLU100
DLYS101
DGLN129
DTRP168
DLYS169
DASN181
DPHE260
DAKG312
DHOH332
DHOH356
DHOH374
DHOH563
DHOH670
DHOH707
DHOH737

site_idBC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE AKG D 312
ChainResidue
DLYS101
DTYR156
DTHR158
DARG160
DASN181
DHIS185
DARG245
DPHE260
DNAD311
DHOH335

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL D 313
ChainResidue
CLYS166
DPHE51
DTHR52
DGLU53

247536

PDB entries from 2026-01-14

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