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3O4V

Crystal structure of E. coli MTA/SAH nucleosidase in complex with (4-Chlorophenyl)thio-DADMe-ImmA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008652biological_processamino acid biosynthetic process
A0008782molecular_functionadenosylhomocysteine nucleosidase activity
A0008930molecular_functionmethylthioadenosine nucleosidase activity
A0009086biological_processmethionine biosynthetic process
A0009116biological_processnucleoside metabolic process
A0009164biological_processnucleoside catabolic process
A0016787molecular_functionhydrolase activity
A0019284biological_processL-methionine salvage from S-adenosylmethionine
A0019509biological_processL-methionine salvage from methylthioadenosine
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0046124biological_processpurine deoxyribonucleoside catabolic process
A0110052biological_processtoxic metabolite repair
B0003824molecular_functioncatalytic activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008652biological_processamino acid biosynthetic process
B0008782molecular_functionadenosylhomocysteine nucleosidase activity
B0008930molecular_functionmethylthioadenosine nucleosidase activity
B0009086biological_processmethionine biosynthetic process
B0009116biological_processnucleoside metabolic process
B0009164biological_processnucleoside catabolic process
B0016787molecular_functionhydrolase activity
B0019284biological_processL-methionine salvage from S-adenosylmethionine
B0019509biological_processL-methionine salvage from methylthioadenosine
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0046124biological_processpurine deoxyribonucleoside catabolic process
B0110052biological_processtoxic metabolite repair
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 4CT A 233
ChainResidue
AILE50
AGLU174
ASER196
AASP197
APHE207
AHOH237
BTYR107
ASER76
AALA77
AGLY78
AALA150
APHE151
AILE152
AGLU172
AMET173

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 235
ChainResidue
APHE151
AASN153
AGLY154
ASER155
AVAL156
AGLY157

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 236
ChainResidue
AHIS180
AASN184
AHOH300
AHOH370
BALA54
BHOH331

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 4CT B 234
ChainResidue
APHE105
ATYR107
BILE50
BSER76
BALA77
BGLY78
BPHE105
BALA150
BPHE151
BILE152
BGLU172
BMET173
BGLU174
BSER196
BASP197
BPHE207
BHOH246

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 237
ChainResidue
AGLU94
AARG96
AALA117
AGLY118
ALYS120
AHOH364
BARG96
BGLU108
BALA117

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 238
ChainResidue
AASP208
ALEU211
AHOH238
AHOH305
BPHE207
BASP208
BHOH289
BHOH327

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE IPA B 233
ChainResidue
AHIS65
AHOH268
AHOH334
AHOH346
BARG162
BHOH382

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01684","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"16109423","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"HAMAP-Rule","id":"MF_01684","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"16109423","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01684","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11591349","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01684","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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