3NYD
Crystal Structure of Kemp Eliminase HG-2 Complexed with Transition State Analog 5-Nitro Benzotriazole
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000272 | biological_process | polysaccharide catabolic process |
| A | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0031176 | molecular_function | endo-1,4-beta-xylanase activity |
| A | 0045493 | biological_process | xylan catabolic process |
| B | 0000272 | biological_process | polysaccharide catabolic process |
| B | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0031176 | molecular_function | endo-1,4-beta-xylanase activity |
| B | 0045493 | biological_process | xylan catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE 3NY A 317 |
| Chain | Residue |
| A | ALA21 |
| A | SER265 |
| A | PHE267 |
| A | HOH879 |
| A | TRP44 |
| A | PRO45 |
| A | GLY82 |
| A | GLY83 |
| A | MET84 |
| A | ASP127 |
| A | LEU236 |
| A | MET237 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ACT A 318 |
| Chain | Residue |
| A | TRP44 |
| A | ALA125 |
| A | ASP127 |
| A | TYR170 |
| A | SER234 |
| A | LEU236 |
| A | HOH482 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT A 319 |
| Chain | Residue |
| A | PRO56 |
| A | SER57 |
| A | ASN60 |
| A | HOH533 |
| A | HOH550 |
| A | HOH741 |
| A | HOH864 |
| B | ARG118 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ACT A 320 |
| Chain | Residue |
| A | GLN58 |
| A | ASN106 |
| A | THR246 |
| A | VAL249 |
| A | HOH379 |
| A | HOH530 |
| A | HOH531 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 321 |
| Chain | Residue |
| A | ARG161 |
| A | HOH521 |
| A | HOH790 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 A 322 |
| Chain | Residue |
| A | ARG118 |
| A | HOH331 |
| A | HOH649 |
| A | HOH748 |
| A | HOH800 |
| B | SER57 |
| B | ASN60 |
| site_id | AC7 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE 3NY B 317 |
| Chain | Residue |
| B | ALA21 |
| B | TRP44 |
| B | PRO45 |
| B | GLY82 |
| B | GLY83 |
| B | MET84 |
| B | ASP127 |
| B | LEU236 |
| B | MET237 |
| B | SER265 |
| B | PHE267 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT B 318 |
| Chain | Residue |
| B | TRP44 |
| B | ALA125 |
| B | ASP127 |
| B | TYR170 |
| B | GLY205 |
| B | SER234 |
| B | LEU236 |
| B | HOH373 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 594 |
| Details | Domain: {"description":"GH10","evidences":[{"source":"PROSITE-ProRule","id":"PRU01096","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton donor"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Nucleophile"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Pyrrolidone carboxylic acid","evidences":[{"source":"UniProtKB","id":"P56588","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
