3NFE
The crystal structure of hemoglobin I from trematomus newnesi in deoxygenated state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004601 | molecular_function | peroxidase activity |
A | 0005344 | molecular_function | oxygen carrier activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0005833 | cellular_component | hemoglobin complex |
A | 0015671 | biological_process | oxygen transport |
A | 0019825 | molecular_function | oxygen binding |
A | 0020037 | molecular_function | heme binding |
A | 0031720 | molecular_function | haptoglobin binding |
A | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
A | 0042744 | biological_process | hydrogen peroxide catabolic process |
A | 0043177 | molecular_function | organic acid binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0072562 | cellular_component | blood microparticle |
A | 0098869 | biological_process | cellular oxidant detoxification |
B | 0004601 | molecular_function | peroxidase activity |
B | 0005344 | molecular_function | oxygen carrier activity |
B | 0005829 | cellular_component | cytosol |
B | 0005833 | cellular_component | hemoglobin complex |
B | 0015671 | biological_process | oxygen transport |
B | 0019825 | molecular_function | oxygen binding |
B | 0020037 | molecular_function | heme binding |
B | 0031720 | molecular_function | haptoglobin binding |
B | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
B | 0042744 | biological_process | hydrogen peroxide catabolic process |
B | 0043177 | molecular_function | organic acid binding |
B | 0046872 | molecular_function | metal ion binding |
B | 0072562 | cellular_component | blood microparticle |
B | 0098869 | biological_process | cellular oxidant detoxification |
C | 0004601 | molecular_function | peroxidase activity |
C | 0005344 | molecular_function | oxygen carrier activity |
C | 0005506 | molecular_function | iron ion binding |
C | 0005833 | cellular_component | hemoglobin complex |
C | 0015671 | biological_process | oxygen transport |
C | 0019825 | molecular_function | oxygen binding |
C | 0020037 | molecular_function | heme binding |
C | 0031720 | molecular_function | haptoglobin binding |
C | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
C | 0042744 | biological_process | hydrogen peroxide catabolic process |
C | 0043177 | molecular_function | organic acid binding |
C | 0046872 | molecular_function | metal ion binding |
C | 0072562 | cellular_component | blood microparticle |
C | 0098869 | biological_process | cellular oxidant detoxification |
D | 0004601 | molecular_function | peroxidase activity |
D | 0005344 | molecular_function | oxygen carrier activity |
D | 0005829 | cellular_component | cytosol |
D | 0005833 | cellular_component | hemoglobin complex |
D | 0015671 | biological_process | oxygen transport |
D | 0019825 | molecular_function | oxygen binding |
D | 0020037 | molecular_function | heme binding |
D | 0031720 | molecular_function | haptoglobin binding |
D | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
D | 0042744 | biological_process | hydrogen peroxide catabolic process |
D | 0043177 | molecular_function | organic acid binding |
D | 0046872 | molecular_function | metal ion binding |
D | 0072562 | cellular_component | blood microparticle |
D | 0098869 | biological_process | cellular oxidant detoxification |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE HEM A 200 |
Chain | Residue |
A | TYR42 |
A | LEU102 |
A | PHE43 |
A | HIS59 |
A | LYS62 |
A | VAL63 |
A | GLN87 |
A | HIS88 |
A | LEU92 |
A | ASN98 |
site_id | AC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE HEM B 400 |
Chain | Residue |
B | TYR41 |
B | PHE42 |
B | HIS63 |
B | LYS66 |
B | LEU88 |
B | HIS92 |
B | LEU96 |
B | VAL98 |
B | ASN102 |
B | PHE103 |
B | LEU141 |
site_id | AC3 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE HEM C 600 |
Chain | Residue |
C | MET32 |
C | TYR42 |
C | PHE43 |
C | HIS45 |
C | TRP46 |
C | HIS59 |
C | VAL63 |
C | GLN87 |
C | HIS88 |
C | LEU92 |
C | ASN98 |
C | LEU102 |
site_id | AC4 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE HEM D 800 |
Chain | Residue |
D | TYR41 |
D | PHE42 |
D | HIS63 |
D | LYS66 |
D | VAL67 |
D | LEU91 |
D | HIS92 |
D | LEU96 |
D | VAL98 |
D | ASN102 |
D | PHE103 |
D | LEU141 |
D | HOH1094 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | Binding site: {"description":"proximal binding residue","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"8144556","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 288 |
Details | Domain: {"description":"Globin","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | Binding site: {"description":"distal binding residue","evidences":[{"source":"PubMed","id":"12093902","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1LA6","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | Binding site: {"description":"proximal binding residue","evidences":[{"source":"PubMed","id":"12093902","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1LA6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1T1N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3D1K","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3NFE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3NG6","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |