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3NDT

HIV-1 Protease Saquinavir:Ritonavir 1:1 complex structure

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
D0004190molecular_functionaspartic-type endopeptidase activity
D0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues29
DetailsBINDING SITE FOR RESIDUE ROC A 101
ChainResidue
AARG9
AGLY50
AILE51
ATHR81
APRO82
AILE85
AHOH116
AHOH324
BARG9
BASP26
BGLY28
AASP26
BALA29
BASP30
BASP31
BGLY49
BGLY50
BILE51
BPRO82
BILE85
BHOH119
CTRP6
AGLY28
AALA29
AASP30
AASP31
AVAL33
AILE48
AGLY49

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 102
ChainResidue
BSER38

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS A 103
ChainResidue
ALYS15
AGLY18
AILE64
ADMS104
BGLY18

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DMS A 104
ChainResidue
AGLY18
ADMS103
AHOH115
BLYS15
BILE16
BGLY17
BGLY18
BILE64

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 102
ChainResidue
BLYS8

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 103
ChainResidue
ALYS15
BILE64

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA C 100
ChainResidue
CTHR12
CGLU65
CGLY68

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL C 101
ChainResidue
DGLY40

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DMS C 102
ChainResidue
CGLY17
CDMS103
DLYS14
DILE15
DGLY16
DGLY17
DILE63

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS C 103
ChainResidue
CLYS14
CILE15
CGLY16
CGLY17
CDMS102
DGLY17

site_idBC2
Number of Residues26
DetailsBINDING SITE FOR RESIDUE ROC D 100
ChainResidue
CARG8
CLEU23
CASP25
CGLY27
CALA28
CASP29
CASP30
CGLY48
CGLY49
CILE50
CPRO81
CILE84
CHOH107
DARG8
DASP25
DGLY27
DALA28
DASP29
DASP30
DGLY48
DGLY49
DILE50
DTHR80
DILE84
DHOH102
DHOH116

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA23-ILE34

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsLIPID: N-myristoyl glycine; by host => ECO:0000250
ChainResidueDetails
AGLN3
BGLN3
CGLN2
DGLN2

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PDB entries from 2024-09-11

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