English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3NB2

Crystal structure of E. coli O157:H7 effector protein NleL

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004842	molecular_function	ubiquitin-protein transferase activity
A	0016567	biological_process	protein ubiquitination
B	0004842	molecular_function	ubiquitin-protein transferase activity
B	0016567	biological_process	protein ubiquitination
C	0004842	molecular_function	ubiquitin-protein transferase activity
C	0016567	biological_process	protein ubiquitination
D	0004842	molecular_function	ubiquitin-protein transferase activity
D	0016567	biological_process	protein ubiquitination

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL A 1

Chain	Residue
A	GOL2
A	PHE440
A	MET446
C	TYR401
C	TRP439

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 2

Chain	Residue
A	GOL1
A	TYR401
A	DTT785
C	MET446

site_id	AC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 4

Chain	Residue
A	GOL19
A	HOH49
A	ASN356
A	TYR357
A	HOH789
C	TYR357

site_id	AC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 7

Chain	Residue
A	PHE607
A	GLY610
A	ILE611
A	HOH909
B	SER511
B	HOH938

site_id	AC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 12

Chain	Residue
A	ILE412
A	HIS413
A	ASN450
A	HOH857
A	HOH900
A	HOH1054

site_id	AC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 13

Chain	Residue
A	HIS552
A	ASN564
A	HOH906
B	ASN564

site_id	AC7
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL A 14

Chain	Residue
A	ASP613
A	ILE614
A	LEU615
A	SER617
A	HOH934
B	ASP517
B	GLY518
B	HOH1130

site_id	AC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 15

Chain	Residue
A	SER443
A	ILE444
A	HOH824
A	HOH1071
C	THR435
C	TRP439

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 16

Chain	Residue
A	PHE769
A	PRO770
A	GLU771
A	ILE772

site_id	BC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 18

Chain	Residue
A	GLY321
A	ASP322
A	VAL323
A	LYS374
A	TYR375
A	ASP378

site_id	BC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 19

Chain	Residue
A	GOL4
A	TYR357
A	HOH988
C	HOH59
C	ASN356
C	GLU449

site_id	BC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 24

Chain	Residue
A	TYR724
A	VAL734
A	TYR737
A	ASN738

site_id	BC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 25

Chain	Residue
A	ARG782
A	HOH836
C	SER469
C	TYR470

site_id	BC5
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MES A 3

Chain	Residue
A	ARG234
A	MET235
A	ASN254
A	GLU255
C	ASP372
C	ASP373
D	ASN191

site_id	BC6
Number of Residues	7
Details	BINDING SITE FOR RESIDUE SO4 A 5

Chain	Residue
A	HIS463
A	PRO464
A	GLY465
A	ALA466
A	HOH855
C	ASN632
C	LYS633

site_id	BC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 A 783

Chain	Residue
A	LYS359
A	HOH870
C	GOL22

site_id	BC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE SO4 A 784

Chain	Residue
A	GLU620
A	ARG624
A	TYR636
A	LYS646
A	HOH918

site_id	BC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 A 17

Chain	Residue
A	GLY486
A	MET487
A	GLN488
A	GLU489

site_id	CC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE DTT A 785

Chain	Residue
A	TRP439
C	PHE440
C	SER443
C	ILE444
A	GOL2
A	PHE398
A	THR435
A	ILE436

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL B 3

Chain	Residue
B	ASN356
B	GLU449
B	HOH802
B	HOH1140

site_id	CC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE GOL B 6

Chain	Residue
B	TYR401
D	GOL5

site_id	CC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL B 8

Chain	Residue
A	SER511
B	ASN606
B	PHE607
B	GLY610
B	ILE611
B	SER671
B	HOH878

site_id	CC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL B 10

Chain	Residue
B	TYR357
B	HOH851
D	TYR357
D	GLU449
D	HOH865

site_id	CC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 B 783

Chain	Residue
B	GLY486
B	MET487
B	GLN488
B	GLU489

site_id	CC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 B 784

Chain	Residue
B	ARG399
B	PRO400
B	TYR401
B	VAL402

site_id	CC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE SO4 B 12

Chain	Residue
A	TYR532
A	MET566
A	PHE568
A	PHE569
B	HIS672

site_id	CC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL C 11

Chain	Residue
C	PRO297
C	ILE298
C	LEU299
C	ASN300
C	VAL314
C	SER316

site_id	DC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL C 17

Chain	Residue
C	PHE769
C	PRO770
C	GLU771
C	ILE772

site_id	DC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL C 20

Chain	Residue
C	HOH59
C	ASN356
C	ASN369
C	SER409
C	GLU449
C	HOH830

site_id	DC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GOL C 21

Chain	Residue
C	GOL22
C	TYR447
C	MET448
C	ASN480
C	ARG484
C	HOH805
C	HOH806
C	HOH992
C	HOH1024

site_id	DC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL C 22

Chain	Residue
A	THR358
A	SO4783
A	HOH871
C	GOL21
C	TYR447
C	HOH807
C	HOH983

site_id	DC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL C 23

Chain	Residue
C	SER596
C	HIS600
C	SER774
C	ARG782
C	HOH1048

site_id	DC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE GOL C 29

Chain	Residue
A	THR435
C	ILE444
C	LEU557

site_id	DC7
Number of Residues	8
Details	BINDING SITE FOR RESIDUE MES C 1

Chain	Residue
A	TYR735
A	ASN738
A	ASP742
C	ARG743
C	ASN749
C	PHE751
C	THR752
C	VAL756

site_id	DC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MES C 2

Chain	Residue
A	ASP372
A	ASP373
C	ARG234
C	ASN254
C	GLU255
C	HOH889

site_id	DC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 C 783

Chain	Residue
C	GLU620
C	ARG624
C	TYR636
C	HOH932

site_id	EC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE SO4 C 3

Chain	Residue
C	ARG624

site_id	EC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 C 7

Chain	Residue
C	GLY486
C	MET487
C	GLN488
C	GLU489

site_id	EC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 C 10

Chain	Residue
C	SER177
C	LYS178
C	HOH786
C	HOH1235

site_id	EC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 C 784

Chain	Residue
C	ARG399
C	PRO400
C	TYR401
C	VAL402

site_id	EC5
Number of Residues	8
Details	BINDING SITE FOR RESIDUE DTT C 785

Chain	Residue
A	TYR736
A	MET760
A	HIS764
A	GLU767
C	HOH147
C	SER733
C	TYR735
C	TYR736

site_id	EC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE GOL D 5

Chain	Residue
B	GOL6
D	TYR401

site_id	EC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE GOL D 9

Chain	Residue
D	TYR736
D	HIS764
D	HOH789

site_id	EC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL D 26

Chain	Residue
B	LYS766
B	ARG782
D	ASP434
D	TYR459
D	SER469
D	TYR470

site_id	EC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE GOL D 27

Chain	Residue
D	ARG624
D	TYR636
D	LYS646

site_id	FC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL D 28

Chain	Residue
D	LEU366
D	ASN369
D	ASP408
D	SER409

site_id	FC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MES D 4

Chain	Residue
B	ASP372
B	ASP373
D	ARG234
D	ASN254
D	GLU255

site_id	FC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MES D 783

Chain	Residue
B	ARG234
B	ASN254
B	GLU255
D	ASP372
D	ASP373
D	LYS374
D	HOH830

site_id	FC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 D 784

Chain	Residue
D	GLY486
D	MET487
D	GLN488
D	GLU489

site_id	FC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 D 785

Chain	Residue
D	ARG399
D	PRO400
D	TYR401
D	VAL402

site_id	FC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 D 15

Chain	Residue
B	HOH1145
D	PHE398
D	THR435
D	TRP439
D	HOH885
D	HOH908

site_id	FC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 D 16

Chain	Residue
A	TRP187
D	ARG234

239803

PDB entries from 2025-08-06

PDB statistics

PDBj update info

Contact PDBj

numon