3N7U
NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana in complex with NAD and azide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0005829 | cellular_component | cytosol |
| A | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| A | 0009507 | cellular_component | chloroplast |
| A | 0009536 | cellular_component | plastid |
| A | 0009579 | cellular_component | thylakoid |
| A | 0009611 | biological_process | response to wounding |
| A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| A | 0042183 | biological_process | formate catabolic process |
| A | 0051287 | molecular_function | NAD binding |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0005829 | cellular_component | cytosol |
| B | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| B | 0009507 | cellular_component | chloroplast |
| B | 0009536 | cellular_component | plastid |
| B | 0009579 | cellular_component | thylakoid |
| B | 0009611 | biological_process | response to wounding |
| B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| B | 0042183 | biological_process | formate catabolic process |
| B | 0051287 | molecular_function | NAD binding |
| C | 0005739 | cellular_component | mitochondrion |
| C | 0005829 | cellular_component | cytosol |
| C | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| C | 0009507 | cellular_component | chloroplast |
| C | 0009536 | cellular_component | plastid |
| C | 0009579 | cellular_component | thylakoid |
| C | 0009611 | biological_process | response to wounding |
| C | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| C | 0042183 | biological_process | formate catabolic process |
| C | 0051287 | molecular_function | NAD binding |
| D | 0005739 | cellular_component | mitochondrion |
| D | 0005829 | cellular_component | cytosol |
| D | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| D | 0009507 | cellular_component | chloroplast |
| D | 0009536 | cellular_component | plastid |
| D | 0009579 | cellular_component | thylakoid |
| D | 0009611 | biological_process | response to wounding |
| D | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| D | 0042183 | biological_process | formate catabolic process |
| D | 0051287 | molecular_function | NAD binding |
| E | 0005739 | cellular_component | mitochondrion |
| E | 0005829 | cellular_component | cytosol |
| E | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| E | 0009507 | cellular_component | chloroplast |
| E | 0009536 | cellular_component | plastid |
| E | 0009579 | cellular_component | thylakoid |
| E | 0009611 | biological_process | response to wounding |
| E | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| E | 0042183 | biological_process | formate catabolic process |
| E | 0051287 | molecular_function | NAD binding |
| F | 0005739 | cellular_component | mitochondrion |
| F | 0005829 | cellular_component | cytosol |
| F | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| F | 0009507 | cellular_component | chloroplast |
| F | 0009536 | cellular_component | plastid |
| F | 0009579 | cellular_component | thylakoid |
| F | 0009611 | biological_process | response to wounding |
| F | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| F | 0042183 | biological_process | formate catabolic process |
| F | 0051287 | molecular_function | NAD binding |
| G | 0005739 | cellular_component | mitochondrion |
| G | 0005829 | cellular_component | cytosol |
| G | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| G | 0009507 | cellular_component | chloroplast |
| G | 0009536 | cellular_component | plastid |
| G | 0009579 | cellular_component | thylakoid |
| G | 0009611 | biological_process | response to wounding |
| G | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| G | 0042183 | biological_process | formate catabolic process |
| G | 0051287 | molecular_function | NAD binding |
| H | 0005739 | cellular_component | mitochondrion |
| H | 0005829 | cellular_component | cytosol |
| H | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| H | 0009507 | cellular_component | chloroplast |
| H | 0009536 | cellular_component | plastid |
| H | 0009579 | cellular_component | thylakoid |
| H | 0009611 | biological_process | response to wounding |
| H | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| H | 0042183 | biological_process | formate catabolic process |
| H | 0051287 | molecular_function | NAD binding |
| I | 0005739 | cellular_component | mitochondrion |
| I | 0005829 | cellular_component | cytosol |
| I | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| I | 0009507 | cellular_component | chloroplast |
| I | 0009536 | cellular_component | plastid |
| I | 0009579 | cellular_component | thylakoid |
| I | 0009611 | biological_process | response to wounding |
| I | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| I | 0042183 | biological_process | formate catabolic process |
| I | 0051287 | molecular_function | NAD binding |
| J | 0005739 | cellular_component | mitochondrion |
| J | 0005829 | cellular_component | cytosol |
| J | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| J | 0009507 | cellular_component | chloroplast |
| J | 0009536 | cellular_component | plastid |
| J | 0009579 | cellular_component | thylakoid |
| J | 0009611 | biological_process | response to wounding |
| J | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| J | 0042183 | biological_process | formate catabolic process |
| J | 0051287 | molecular_function | NAD binding |
| K | 0005739 | cellular_component | mitochondrion |
| K | 0005829 | cellular_component | cytosol |
| K | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| K | 0009507 | cellular_component | chloroplast |
| K | 0009536 | cellular_component | plastid |
| K | 0009579 | cellular_component | thylakoid |
| K | 0009611 | biological_process | response to wounding |
| K | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| K | 0042183 | biological_process | formate catabolic process |
| K | 0051287 | molecular_function | NAD binding |
| L | 0005739 | cellular_component | mitochondrion |
| L | 0005829 | cellular_component | cytosol |
| L | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| L | 0009507 | cellular_component | chloroplast |
| L | 0009536 | cellular_component | plastid |
| L | 0009579 | cellular_component | thylakoid |
| L | 0009611 | biological_process | response to wounding |
| L | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| L | 0042183 | biological_process | formate catabolic process |
| L | 0051287 | molecular_function | NAD binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 32 |
| Details | BINDING SITE FOR RESIDUE NAD A 401 |
| Chain | Residue |
| A | ILE122 |
| A | MET255 |
| A | PRO256 |
| A | ASN282 |
| A | ALA283 |
| A | ARG284 |
| A | ASP308 |
| A | HIS332 |
| A | SER334 |
| A | GLY335 |
| A | GLN376 |
| A | ASN146 |
| A | TYR377 |
| A | HOH383 |
| A | AZI403 |
| A | HOH585 |
| A | HOH586 |
| A | HOH588 |
| A | HOH589 |
| A | HOH590 |
| A | HOH591 |
| A | HOH592 |
| A | VAL147 |
| A | HOH593 |
| A | HOH595 |
| A | HOH596 |
| A | VAL150 |
| A | GLY200 |
| A | ARG201 |
| A | ILE202 |
| A | ASP221 |
| A | ARG222 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI A 403 |
| Chain | Residue |
| A | PRO97 |
| A | PHE98 |
| A | ILE122 |
| A | ASN146 |
| A | ARG284 |
| A | HIS332 |
| A | NAD401 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1 |
| Chain | Residue |
| A | ARG354 |
| A | PRO362 |
| site_id | AC4 |
| Number of Residues | 34 |
| Details | BINDING SITE FOR RESIDUE NAD B 401 |
| Chain | Residue |
| B | HOH14 |
| B | ILE122 |
| B | ASN146 |
| B | VAL147 |
| B | VAL150 |
| B | GLY200 |
| B | ARG201 |
| B | ILE202 |
| B | ASP221 |
| B | ARG222 |
| B | MET255 |
| B | PRO256 |
| B | ASN282 |
| B | ALA283 |
| B | ARG284 |
| B | ASP308 |
| B | VAL309 |
| B | HIS332 |
| B | SER334 |
| B | GLY335 |
| B | GLN376 |
| B | TYR377 |
| B | AZI403 |
| B | HOH413 |
| B | HOH588 |
| B | HOH589 |
| B | HOH591 |
| B | HOH592 |
| B | HOH593 |
| B | HOH594 |
| B | HOH595 |
| B | HOH596 |
| B | HOH597 |
| B | HOH598 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI B 403 |
| Chain | Residue |
| B | PRO97 |
| B | PHE98 |
| B | ILE122 |
| B | ASN146 |
| B | ARG284 |
| B | HIS332 |
| B | NAD401 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 2 |
| Chain | Residue |
| B | HOH27 |
| B | ARG354 |
| B | PRO362 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 16 |
| Chain | Residue |
| B | TYR184 |
| B | ARG185 |
| B | ASN326 |
| B | HOH611 |
| B | HOH687 |
| site_id | AC8 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD C 401 |
| Chain | Residue |
| C | MET255 |
| C | PRO256 |
| C | ASN282 |
| C | ALA283 |
| C | ARG284 |
| C | ASP308 |
| C | VAL309 |
| C | HIS332 |
| C | SER334 |
| C | GLY335 |
| C | GLN376 |
| C | AZI403 |
| C | HOH430 |
| C | HOH548 |
| C | HOH549 |
| C | HOH551 |
| C | HOH552 |
| C | HOH553 |
| C | HOH554 |
| C | HOH555 |
| C | HOH557 |
| C | HOH558 |
| C | HOH559 |
| C | HOH667 |
| C | ILE122 |
| C | ASN146 |
| C | VAL147 |
| C | VAL150 |
| C | GLY200 |
| C | ARG201 |
| C | ILE202 |
| C | ASP221 |
| C | ARG222 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI C 403 |
| Chain | Residue |
| C | PRO97 |
| C | PHE98 |
| C | ILE122 |
| C | ASN146 |
| C | ARG284 |
| C | HIS332 |
| C | NAD401 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 3 |
| Chain | Residue |
| C | ARG354 |
| C | PRO362 |
| C | HOH665 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL C 10 |
| Chain | Residue |
| C | ARG378 |
| C | HOH688 |
| E | ARG60 |
| E | ASP61 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL C 17 |
| Chain | Residue |
| C | TYR184 |
| C | ARG185 |
| C | ASN326 |
| site_id | BC4 |
| Number of Residues | 32 |
| Details | BINDING SITE FOR RESIDUE NAD D 401 |
| Chain | Residue |
| D | HOH3 |
| D | HOH6 |
| D | ILE122 |
| D | ASN146 |
| D | VAL147 |
| D | VAL150 |
| D | GLY200 |
| D | ARG201 |
| D | ILE202 |
| D | ASP221 |
| D | ARG222 |
| D | MET255 |
| D | PRO256 |
| D | ASN282 |
| D | ALA283 |
| D | ARG284 |
| D | ASP308 |
| D | HIS332 |
| D | SER334 |
| D | GLY335 |
| D | GLN376 |
| D | AZI403 |
| D | HOH562 |
| D | HOH563 |
| D | HOH565 |
| D | HOH566 |
| D | HOH567 |
| D | HOH568 |
| D | HOH569 |
| D | HOH570 |
| D | HOH571 |
| D | HOH649 |
| site_id | BC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI D 403 |
| Chain | Residue |
| D | PRO97 |
| D | PHE98 |
| D | ILE122 |
| D | ASN146 |
| D | ARG284 |
| D | HIS332 |
| D | NAD401 |
| site_id | BC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 D 4 |
| Chain | Residue |
| D | ARG354 |
| D | PRO362 |
| D | HOH670 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL D 11 |
| Chain | Residue |
| D | ARG378 |
| J | HOH11 |
| J | ASP61 |
| site_id | BC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL D 18 |
| Chain | Residue |
| D | TYR184 |
| D | ARG185 |
| D | ASN326 |
| site_id | BC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL D 22 |
| Chain | Residue |
| D | ASN170 |
| D | LYS174 |
| D | HOH506 |
| D | HOH579 |
| site_id | CC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE GOL D 25 |
| Chain | Residue |
| D | HIS126 |
| D | HOH391 |
| site_id | CC2 |
| Number of Residues | 32 |
| Details | BINDING SITE FOR RESIDUE NAD E 401 |
| Chain | Residue |
| E | ASN146 |
| E | VAL147 |
| E | VAL150 |
| E | GLY200 |
| E | ARG201 |
| E | ILE202 |
| E | ASP221 |
| E | ARG222 |
| E | MET255 |
| E | PRO256 |
| E | ASN282 |
| E | ALA283 |
| E | ARG284 |
| E | ASP308 |
| E | VAL309 |
| E | HIS332 |
| E | SER334 |
| E | GLY335 |
| E | GLN376 |
| E | AZI403 |
| E | HOH565 |
| E | HOH566 |
| E | HOH568 |
| E | HOH569 |
| E | HOH570 |
| E | HOH571 |
| E | HOH572 |
| E | HOH574 |
| E | HOH575 |
| E | HOH654 |
| H | HOH509 |
| H | HOH510 |
| site_id | CC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE AZI E 403 |
| Chain | Residue |
| E | PRO97 |
| E | PHE98 |
| E | GLY121 |
| E | ILE122 |
| E | ASN146 |
| E | ARG284 |
| E | HIS332 |
| E | NAD401 |
| site_id | CC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL E 379 |
| Chain | Residue |
| E | HOH22 |
| E | ASP125 |
| E | HIS126 |
| E | ASP128 |
| E | HOH513 |
| E | HOH514 |
| site_id | CC5 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD F 401 |
| Chain | Residue |
| F | ASN146 |
| F | VAL147 |
| F | VAL150 |
| F | GLY200 |
| F | ARG201 |
| F | ILE202 |
| F | HIS220 |
| F | ASP221 |
| F | ARG222 |
| F | MET255 |
| F | PRO256 |
| F | ASN282 |
| F | ALA283 |
| F | ARG284 |
| F | ASP308 |
| F | VAL309 |
| F | HIS332 |
| F | SER334 |
| F | GLY335 |
| F | GLN376 |
| F | AZI403 |
| F | HOH405 |
| F | HOH410 |
| F | HOH534 |
| F | HOH535 |
| F | HOH537 |
| F | HOH538 |
| F | HOH539 |
| F | HOH540 |
| F | HOH541 |
| F | HOH542 |
| F | HOH543 |
| F | HOH544 |
| site_id | CC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI F 403 |
| Chain | Residue |
| F | PRO97 |
| F | PHE98 |
| F | ILE122 |
| F | ASN146 |
| F | ARG284 |
| F | HIS332 |
| F | NAD401 |
| site_id | CC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 F 20 |
| Chain | Residue |
| F | ARG354 |
| F | PRO362 |
| F | HOH402 |
| F | HOH631 |
| site_id | CC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL F 26 |
| Chain | Residue |
| F | TYR102 |
| F | VAL103 |
| F | HIS126 |
| F | ASP128 |
| F | HOH508 |
| F | HOH545 |
| F | HOH614 |
| site_id | CC9 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD G 401 |
| Chain | Residue |
| G | HOH21 |
| G | PHE98 |
| G | ILE122 |
| G | ASN146 |
| G | VAL147 |
| G | VAL150 |
| G | GLY200 |
| G | ARG201 |
| G | ILE202 |
| G | ASP221 |
| G | ARG222 |
| G | MET255 |
| G | PRO256 |
| G | ASN282 |
| G | ALA283 |
| G | ARG284 |
| G | ASP308 |
| G | HIS332 |
| G | SER334 |
| G | GLY335 |
| G | GLN376 |
| G | HOH402 |
| G | AZI403 |
| G | HOH479 |
| G | HOH543 |
| G | HOH544 |
| G | HOH546 |
| G | HOH547 |
| G | HOH548 |
| G | HOH549 |
| G | HOH551 |
| I | HOH502 |
| I | HOH503 |
| site_id | DC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI G 403 |
| Chain | Residue |
| G | PRO97 |
| G | PHE98 |
| G | ILE122 |
| G | ASN146 |
| G | ARG284 |
| G | HIS332 |
| G | NAD401 |
| site_id | DC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 G 5 |
| Chain | Residue |
| G | THR138 |
| G | LYS369 |
| G | ASP370 |
| G | HOH456 |
| G | HOH627 |
| site_id | DC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL G 9 |
| Chain | Residue |
| B | ARG378 |
| G | ARG60 |
| G | ASP61 |
| G | HOH498 |
| G | HOH532 |
| site_id | DC4 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD H 401 |
| Chain | Residue |
| H | PHE98 |
| H | ILE122 |
| H | ASN146 |
| H | VAL147 |
| H | VAL150 |
| H | GLY200 |
| H | ARG201 |
| H | ILE202 |
| H | ASP221 |
| H | ARG222 |
| H | MET255 |
| H | PRO256 |
| H | ASN282 |
| H | ALA283 |
| H | ARG284 |
| H | ASP308 |
| H | HIS332 |
| H | SER334 |
| H | GLY335 |
| H | GLN376 |
| H | AZI403 |
| H | HOH543 |
| H | HOH544 |
| H | HOH546 |
| H | HOH547 |
| H | HOH548 |
| H | HOH549 |
| H | HOH550 |
| H | HOH551 |
| H | HOH553 |
| H | HOH554 |
| H | HOH555 |
| H | HOH625 |
| site_id | DC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI H 403 |
| Chain | Residue |
| H | PRO97 |
| H | PHE98 |
| H | ILE122 |
| H | ASN146 |
| H | ARG284 |
| H | HIS332 |
| H | NAD401 |
| site_id | DC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 H 6 |
| Chain | Residue |
| H | GOL12 |
| H | LYS115 |
| H | THR138 |
| H | LYS369 |
| H | HOH558 |
| site_id | DC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL H 12 |
| Chain | Residue |
| H | SO46 |
| H | TYR355 |
| H | GLU359 |
| H | PHE361 |
| H | TYR366 |
| H | HOH391 |
| H | HOH482 |
| site_id | DC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL H 27 |
| Chain | Residue |
| H | HOH17 |
| H | TYR102 |
| H | THR104 |
| H | HIS126 |
| H | ASP128 |
| H | HOH556 |
| site_id | DC9 |
| Number of Residues | 32 |
| Details | BINDING SITE FOR RESIDUE NAD I 401 |
| Chain | Residue |
| I | ILE122 |
| I | ASN146 |
| I | VAL147 |
| I | VAL150 |
| I | GLY200 |
| I | ARG201 |
| I | ILE202 |
| I | ASP221 |
| I | ARG222 |
| I | MET255 |
| I | PRO256 |
| I | ASN282 |
| I | ALA283 |
| I | ARG284 |
| I | ASP308 |
| I | VAL309 |
| I | HIS332 |
| I | SER334 |
| I | GLY335 |
| I | GLN376 |
| I | AZI403 |
| I | HOH521 |
| I | HOH522 |
| I | HOH524 |
| I | HOH525 |
| I | HOH526 |
| I | HOH527 |
| I | HOH528 |
| I | HOH529 |
| I | HOH531 |
| I | HOH532 |
| I | HOH613 |
| site_id | EC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI I 403 |
| Chain | Residue |
| I | PRO97 |
| I | PHE98 |
| I | ILE122 |
| I | ASN146 |
| I | ARG284 |
| I | HIS332 |
| I | NAD401 |
| site_id | EC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 I 7 |
| Chain | Residue |
| I | GOL13 |
| I | LYS115 |
| I | THR138 |
| I | LYS369 |
| I | HOH536 |
| site_id | EC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL I 13 |
| Chain | Residue |
| I | SO47 |
| I | ARG354 |
| I | TYR355 |
| I | GLU359 |
| I | PHE361 |
| I | TYR366 |
| I | HOH594 |
| site_id | EC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL I 19 |
| Chain | Residue |
| I | LEU57 |
| I | LEU342 |
| I | ALA346 |
| I | HOH513 |
| site_id | EC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL I 23 |
| Chain | Residue |
| I | TYR102 |
| I | HIS126 |
| I | ASP128 |
| I | HOH418 |
| I | HOH490 |
| I | HOH534 |
| site_id | EC6 |
| Number of Residues | 31 |
| Details | BINDING SITE FOR RESIDUE NAD J 401 |
| Chain | Residue |
| J | HOH18 |
| J | PHE98 |
| J | ILE122 |
| J | ASN146 |
| J | VAL147 |
| J | VAL150 |
| J | GLY200 |
| J | ARG201 |
| J | ILE202 |
| J | ASP221 |
| J | ARG222 |
| J | MET255 |
| J | PRO256 |
| J | ASN282 |
| J | ARG284 |
| J | ASP308 |
| J | VAL309 |
| J | HIS332 |
| J | SER334 |
| J | GLY335 |
| J | GLN376 |
| J | AZI403 |
| J | HOH410 |
| J | HOH495 |
| J | HOH496 |
| J | HOH498 |
| J | HOH499 |
| J | HOH500 |
| J | HOH501 |
| K | HOH484 |
| K | HOH485 |
| site_id | EC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI J 403 |
| Chain | Residue |
| J | PRO97 |
| J | PHE98 |
| J | ILE122 |
| J | ASN146 |
| J | ARG284 |
| J | HIS332 |
| J | NAD401 |
| site_id | EC8 |
| Number of Residues | 33 |
| Details | BINDING SITE FOR RESIDUE NAD K 401 |
| Chain | Residue |
| K | ILE122 |
| K | ASN146 |
| K | VAL147 |
| K | VAL150 |
| K | GLY200 |
| K | ARG201 |
| K | ILE202 |
| K | ASP221 |
| K | ARG222 |
| K | MET255 |
| K | PRO256 |
| K | ASN282 |
| K | ALA283 |
| K | ARG284 |
| K | ASP308 |
| K | VAL309 |
| K | HIS332 |
| K | SER334 |
| K | GLY335 |
| K | GLN376 |
| K | AZI403 |
| K | HOH509 |
| K | HOH510 |
| K | HOH512 |
| K | HOH513 |
| K | HOH514 |
| K | HOH515 |
| K | HOH516 |
| K | HOH517 |
| K | HOH519 |
| K | HOH520 |
| K | HOH521 |
| K | HOH645 |
| site_id | EC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI K 403 |
| Chain | Residue |
| K | PRO97 |
| K | PHE98 |
| K | ILE122 |
| K | ASN146 |
| K | ARG284 |
| K | HIS332 |
| K | NAD401 |
| site_id | FC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 K 8 |
| Chain | Residue |
| I | HOH633 |
| K | GOL14 |
| K | LYS115 |
| K | THR138 |
| K | LYS369 |
| K | HOH524 |
| site_id | FC2 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL K 14 |
| Chain | Residue |
| K | SO48 |
| K | ARG354 |
| K | TYR355 |
| K | GLY358 |
| K | GLU359 |
| K | PHE361 |
| K | TYR366 |
| K | HOH629 |
| K | HOH630 |
| site_id | FC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL K 15 |
| Chain | Residue |
| J | GLU364 |
| J | HOH405 |
| K | TYR366 |
| K | LYS369 |
| K | GLU372 |
| K | ALA374 |
| K | ARG378 |
| site_id | FC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL K 24 |
| Chain | Residue |
| K | TYR102 |
| K | HIS126 |
| K | ASP128 |
| K | HOH522 |
| K | HOH624 |
| site_id | FC5 |
| Number of Residues | 34 |
| Details | BINDING SITE FOR RESIDUE NAD L 401 |
| Chain | Residue |
| L | ILE122 |
| L | ASN146 |
| L | VAL147 |
| L | VAL150 |
| L | GLY200 |
| L | ARG201 |
| L | ILE202 |
| L | ASP221 |
| L | ARG222 |
| L | MET255 |
| L | PRO256 |
| L | ASN282 |
| L | ALA283 |
| L | ARG284 |
| L | ASP308 |
| L | VAL309 |
| L | HIS332 |
| L | SER334 |
| L | GLY335 |
| L | GLN376 |
| L | AZI403 |
| L | HOH547 |
| L | HOH548 |
| L | HOH550 |
| L | HOH551 |
| L | HOH552 |
| L | HOH553 |
| L | HOH554 |
| L | HOH555 |
| L | HOH557 |
| L | HOH558 |
| L | HOH559 |
| L | HOH610 |
| L | HOH615 |
| site_id | FC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AZI L 403 |
| Chain | Residue |
| L | PRO97 |
| L | PHE98 |
| L | ILE122 |
| L | ASN146 |
| L | ARG284 |
| L | HIS332 |
| L | NAD401 |
| site_id | FC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL L 21 |
| Chain | Residue |
| L | TYR102 |
| L | HIS126 |
| L | ASP128 |
| L | HOH388 |
| L | HOH560 |
| L | HOH644 |
Functional Information from PROSITE/UniProt
| site_id | PS00065 |
| Number of Residues | 28 |
| Details | D_2_HYDROXYACID_DH_1 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. IGTVGaGRIGklllqrlkpfgcn.LLyHD |
| Chain | Residue | Details |
| A | ILE194-ASP221 |
| site_id | PS00670 |
| Number of Residues | 23 |
| Details | D_2_HYDROXYACID_DH_2 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. MLpkCDVIvINmPltekTrgMfN |
| Chain | Residue | Details |
| A | MET244-ASN266 |
| site_id | PS00671 |
| Number of Residues | 17 |
| Details | D_2_HYDROXYACID_DH_3 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. LKkGvLIVNnARGaIME |
| Chain | Residue | Details |
| A | LEU273-GLU289 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03210","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 132 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03210","evidenceCode":"ECO:0000255"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAY-2010","submissionDatabase":"PDB data bank","title":"Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis thaliana.","authors":["Shabalin I.G.","Polyakov K.M.","Skirgello O.E.","Tishkov V.I.","Popov V.O."]}}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 24 |
| Details | Site: {"description":"Important for catalytic activity","evidences":[{"source":"HAMAP-Rule","id":"MF_03210","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |






