3N2E
Crystal structure of Helicobactor pylori shikimate kinase in complex with NSC162535
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0004765 | molecular_function | shikimate kinase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0008652 | biological_process | amino acid biosynthetic process |
| A | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
| A | 0009423 | biological_process | chorismate biosynthetic process |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0019752 | biological_process | carboxylic acid metabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0004765 | molecular_function | shikimate kinase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0008652 | biological_process | amino acid biosynthetic process |
| B | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
| B | 0009423 | biological_process | chorismate biosynthetic process |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0019752 | biological_process | carboxylic acid metabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0004765 | molecular_function | shikimate kinase activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0008652 | biological_process | amino acid biosynthetic process |
| C | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
| C | 0009423 | biological_process | chorismate biosynthetic process |
| C | 0016301 | molecular_function | kinase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0019752 | biological_process | carboxylic acid metabolic process |
| C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE OSA A 1001 |
| Chain | Residue |
| A | PHE9 |
| A | MET84 |
| A | ARG116 |
| A | ARG132 |
| A | LEU135 |
| A | TYR136 |
| A | HOH179 |
| A | HOH201 |
| A | TLA2001 |
| A | TLA2002 |
| A | MET10 |
| A | ARG45 |
| A | PHE48 |
| A | GLU53 |
| A | ARG57 |
| A | GLY80 |
| A | GLY81 |
| A | VAL83 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE TLA A 2001 |
| Chain | Residue |
| A | GLU53 |
| A | ARG116 |
| A | LEU118 |
| A | ARG132 |
| A | HOH184 |
| A | OSA1001 |
| site_id | AC3 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE TLA A 2002 |
| Chain | Residue |
| A | PHE9 |
| A | PHE101 |
| A | ILE105 |
| A | ARG116 |
| A | LEU119 |
| A | ALA125 |
| A | LEU128 |
| A | PHE129 |
| A | ARG132 |
| A | OSA1001 |
| site_id | AC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE OSA B 1001 |
| Chain | Residue |
| B | PHE9 |
| B | MET10 |
| B | ARG45 |
| B | PHE48 |
| B | GLU53 |
| B | ARG57 |
| B | GLY80 |
| B | VAL83 |
| B | MET84 |
| B | ARG116 |
| B | ARG132 |
| B | LEU135 |
| B | TYR136 |
| B | HOH170 |
| B | HOH187 |
| B | TLA2001 |
| B | TLA2003 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE TLA B 2001 |
| Chain | Residue |
| B | GLU53 |
| B | ARG116 |
| B | ARG132 |
| B | HOH172 |
| B | OSA1001 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE TLA B 2002 |
| Chain | Residue |
| B | MET10 |
| B | GLY11 |
| B | SER12 |
| B | GLY13 |
| B | LYS14 |
| B | SER15 |
| B | ASP31 |
| B | HOH198 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE TLA B 2003 |
| Chain | Residue |
| B | PHE9 |
| B | MET10 |
| B | LEU104 |
| B | ILE105 |
| B | ARG116 |
| B | ALA125 |
| B | LEU128 |
| B | ARG132 |
| B | OSA1001 |
Functional Information from PROSITE/UniProt
| site_id | PS01128 |
| Number of Residues | 27 |
| Details | SHIKIMATE_KINASE Shikimate kinase signature. RmfEknlIdelktlktph..VIStGGGiV |
| Chain | Residue | Details |
| A | ARG57-VAL83 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 28 |
| Details | Region: {"description":"LID domain"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 11 |
| Details | Binding site: {} |
| Chain | Residue | Details |
